Literature DB >> 2253709

The genetic code in mitochondria and chloroplasts.

T H Jukes1, S Osawa.   

Abstract

The universal genetic code is used without changes in chloroplasts and in mitochondria of green plants. Non-plant mitochondria use codes that include changes from the universal code. Chloroplasts use 31 anticodons in translating the code; a number smaller than that used by bacteria, because chloroplasts have eliminated 10 CNN anticodons that are found in bacteria. Green plant mitochondria (mt) obtain some tRNAs from the cytosol, and genes for some other tRNAs have been acquired from chloroplast DNA. The code in non-plant mt differs from the universal code in the following usages found in various organisms: UGA for Trp, AUA for Met, AGR for Ser and stop, AAA for Asn, CUN for Thr, and possibly UAA for Tyr. CGN codons are not used by Torulopsis yeast mt. Non-plant mt, e.g. in vertebrates, may use a minimum of 22 anticodons for complete translation of mRNA sequences. The following possible causes are regarded as contributing to changes in the non-plant mt: directional mutation pressure, genomic economization, changes in charging specificity of tRNAs, loss of release factor RF2, changes in RF1, changes in anticodons, loss of lysidine-forming enzyme system, and disappearance of codons from coding sequences.

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Year:  1990        PMID: 2253709     DOI: 10.1007/bf01936921

Source DB:  PubMed          Journal:  Experientia        ISSN: 0014-4754


  36 in total

1.  Identification of two methionine transfer RNA genes in the maize mitochondrial genome.

Authors:  T D Parks; W G Dougherty; C S Levings; D H Timothy
Journal:  Plant Physiol       Date:  1984-12       Impact factor: 8.340

2.  APhaseolus vulgaris mitochondrial tRNA(Leu) is identical to its cytoplasmic counterpart: sequencing andin vivo transcription of the gene corresponding to the cytoplasmic tRNA(Leu.).

Authors:  G A Green; L Marechal; J H Weil; P Guillemaut
Journal:  Plant Mol Biol       Date:  1987-01       Impact factor: 4.076

3.  Organization and expression of algal (Chlamydomonas reinhardtii) mitochondrial DNA.

Authors:  M W Gray; P H Boer
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  1988-05-31       Impact factor: 6.237

Review 4.  Evolution of the genetic code as affected by anticodon content.

Authors:  S Osawa; T H Jukes
Journal:  Trends Genet       Date:  1988-07       Impact factor: 11.639

5.  Nucleotide sequence of bean mitochondrial tRNALeu4 and of its cytoplasmic counterpart. Re-examination of the modified nucleotide present at position 12 in bean mitochondrial and cytoplasmic tRNALeu1 sequences.

Authors:  L Maréchal-Drouard; P Guillemaut
Journal:  Nucleic Acids Res       Date:  1988-12-23       Impact factor: 16.971

6.  Altered genetic code in Paramecium mitochondria: possible evolutionary trends.

Authors:  J J Seilhamer; D J Cummings
Journal:  Mol Gen Genet       Date:  1982

7.  Evolution of rRNA and origin of mitochondria.

Authors:  H Küntzel; H G Köchel
Journal:  Nature       Date:  1981-10-29       Impact factor: 49.962

8.  Evolution of the mitochondrial genetic code. I. Origin of AGR serine and stop codons in metazoan mitochondria.

Authors:  S Osawa; T Ohama; T H Jukes; K Watanabe
Journal:  J Mol Evol       Date:  1989-09       Impact factor: 2.395

9.  Transfer RNAs of potato (Solanum tuberosum) mitochondria have different genetic origins.

Authors:  L Maréchal-Drouard; P Guillemaut; A Cosset; M Arbogast; F Weber; J H Weil; A Dietrich
Journal:  Nucleic Acids Res       Date:  1990-07-11       Impact factor: 16.971

10.  Location of transcriptional control signals and transfer RNA sequences in Torulopsis glabrata mitochondrial DNA.

Authors:  G D Clark-Walker; C R McArthur; K S Sriprakash
Journal:  EMBO J       Date:  1985-02       Impact factor: 11.598

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  34 in total

1.  tRNomics: analysis of tRNA genes from 50 genomes of Eukarya, Archaea, and Bacteria reveals anticodon-sparing strategies and domain-specific features.

Authors:  Christian Marck; Henri Grosjean
Journal:  RNA       Date:  2002-10       Impact factor: 4.942

2.  The rules of variation: amino acid exchange according to the rotating circular genetic code.

Authors:  Fernando Castro-Chavez
Journal:  J Theor Biol       Date:  2010-04-03       Impact factor: 2.691

Review 3.  Recent evidence for evolution of the genetic code.

Authors:  S Osawa; T H Jukes; K Watanabe; A Muto
Journal:  Microbiol Rev       Date:  1992-03

Review 4.  Evolution of early eukaryotic cells: genomes, proteomes, and compartments.

Authors:  Lawrence Bogorad
Journal:  Photosynth Res       Date:  2007-10-03       Impact factor: 3.573

5.  Role of premature stop codons in bacterial evolution.

Authors:  Tit-Yee Wong; Sanjit Fernandes; Naby Sankhon; Patrick P Leong; Jimmy Kuo; Jong-Kang Liu
Journal:  J Bacteriol       Date:  2008-08-15       Impact factor: 3.490

6.  Mitochondrial and plastid genome architecture: Reoccurring themes, but significant differences at the extremes.

Authors:  David Roy Smith; Patrick J Keeling
Journal:  Proc Natl Acad Sci U S A       Date:  2015-03-26       Impact factor: 11.205

Review 7.  Mitochondrial ribosomes in cancer.

Authors:  Hyun-Jung Kim; Priyanka Maiti; Antoni Barrientos
Journal:  Semin Cancer Biol       Date:  2017-04-23       Impact factor: 15.707

8.  Genetic code and phylogenetic origin of oomycetous mitochondria.

Authors:  P Karlovsky; B Fartmann
Journal:  J Mol Evol       Date:  1992-03       Impact factor: 2.395

9.  Dictyostelium discoideum mitochondrial DNA encodes a NADH:ubiquinone oxidoreductase subunit which is nuclear encoded in other eukaryotes.

Authors:  R A Cole; M B Slade; K L Williams
Journal:  J Mol Evol       Date:  1995-06       Impact factor: 2.395

10.  The Dictyostelium discoideum mitochondrial genome: a primordial system using the universal code and encoding hydrophilic proteins atypical of metazoan mitochondrial DNA.

Authors:  R A Cole; K L Williams
Journal:  J Mol Evol       Date:  1994-12       Impact factor: 2.395

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