| Literature DB >> 22536145 |
Lyudmila P Trenozhnikova1, Almagul K Khasenova, Assya S Balgimbaeva, Galina B Fedorova, Genrikh S Katrukha, Nina L Tokareva, Boo H Kwa, Azliyati Azizan.
Abstract
We describe the actinomycete strain IMV-70 isolated from the soils of Kazakhstan, which produces potent antibiotics with high levels of antibacterial activity. After the research of its morphological, chemotaxonomic, and cultural characteristics, the strain with potential to be developed further as a novel class of antibiotics with chemotherapeutics potential was identified as Streptomyces sp. IMV-70. In the process of fermentation, the strain Streptomyces spp. IMV-70 produces the antibiotic no. 70, which was isolated from the culture broth by extraction with organic solvents. Antibiotic compound no. 70 was purified and separated into individual components by HPLC, TLC, and column chromatography methods. The main component of the compound is the antibiotic 70-A, which was found to be identical to the peptolide etamycin A. Two other antibiotics 70-B and 70-C have never been described and therefore are new antibiotics. The physical-chemical and biological characteristics of these preparations were described and further researched. Determination of the optimal growth conditions to cultivate actinomycete-producer strain IMV-70 and development of methods to isolate, purify, and accumulate preparations of the new antibiotic no. 70 enable us to research further the potential of this new class of antibiotics.Entities:
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Year: 2012 PMID: 22536145 PMCID: PMC3320011 DOI: 10.1100/2012/594231
Source DB: PubMed Journal: ScientificWorldJournal ISSN: 1537-744X
Figure 1Flowchart for isolation of antibiotic no. 70. Antibiotic no. 70 was isolated from culture broth of the producer IMV-70 by extraction methods. The flowchart for the extraction that produces the powder preparation of compound no. 70 is shown in Figure 1. The antibiotic no. 70 was isolated from culture broth by extraction with ethyl acetate, was subsequently purified from the inactive lipid fraction, and was extracted from the concentrated solution with hexane.
Figure 2(a) HPLC of antibiotic compound no. 70. HPLC analysis was conducted on liquid chromatographer “Knauer” (Germany) with automated data processing system and spectrophotometric detector K = 2501. The chromatographic conditions used were as follows: flow rate, 1 mL/min; detection at wave length 260 and 300 nm; room temperature; loop, 20 μL. Preparative isolation of components of the antibiotic compound A-70 was carried out through elution with a mixture of acetonitrile and water; the content of acetonitrile was gradually increased from 10 to 60%. The main component of the compound is the component with a retention time of 17.85 min. This component constitutes 72–74% of the compound, and was labeled as the component 70-A. Figure 2(a) shows the chromatogram of separation of the antibiotic compound no. 70. The component 70-B (retention time = 19.41 min) constitutes approximately 4% of total components. The components C and D are minor and together add up to less than 1%. The conditions for preparative isolation of individual components on chromatographer “Knauer” (Germany) were developed. The salt-free system acetonitrile-water in gradient elution mode from 10 to 60% of acetonitrile with detection at 300 nm met these optimal conditions. (b) HPLC of the extracted and purified main component 70-A. Conditions of HPLC analysis on liquid chromatographer “Knauer” (Germany) were developed for a more precise separation of the antibiotic compound no. 70 and determination of its components' ratio. By HPLC method, the chromatographically pure sample of the main component 70-A was isolated as shown in Figure 2(b).
Physical-chemical characteristics of antibiotic 70-A.
| UV range (EtOH), | 300 (84) |
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| UV range (H2O), | 340 (80) |
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| HPLC on “Knauer” (Germany), column 4 × 150 mm filled with sorbent “Chromasil A-100 C-18, 5 mcm” (BioChimMac, Moscow), retention time, min. | 17.85 |
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| Purity of the preparation according to HPLC data | 95% |
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| Molecular mass, method MS MALDI-TOF m/z | 879 (M+H)+, 901 (M+Na)+, 917 (M+K)+ |
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| TLC, Kieselgel 60 (Merck) plates | 0.64 |
Figure 3Chromatogram of antibiotic compound no. 70, formed in medium A with soy flour. The antibiotic compounds with a higher ratio of minor components and lower ratio of the main component A are formed on medium A with soy flour, in contrast to the medium containing yeast extract, whereby component A makes up to 74% of total compounds (as shown in Figure 2). Figure 3 shows the chromatogram of the main component of compound no. 70 formed in medium A with soy flour.
Characteristics of certain minor components of antibiotic no. 70.
| Components of antibiotic no. 70 | UV-range, | Molecular mass, m/z, MS | HPLC, “Knauer” | |
|---|---|---|---|---|
| Components of antibiotic no. 70 | MALDI-TOF method | Retention time, min. | Purity of the components, % | |
| Component 70-C | 210; | 917 | 17.53 | 97.06 |
| Component 70-D | 197; | 622 | 14.11 | 93.0 |
(a)
| Test organisms | Minimum inhibitory |
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| concentration, | |
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| 0.1 |
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| 0.25 |
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| 0.05 |
(b)
| Microorganisms | Inhibition zone size (mm) |
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| 24 |
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| 22 |
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| 22 |
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| 24 |
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| 22 |
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| 21 |
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| 23 |
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| 23 |
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| 20 |
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| 24 |
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| 22 |
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| 22 |
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| 22 |
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| 25 |
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| 26 |
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| 24 |
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| 19 |
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| 16 |
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| 16 |
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| 17 |
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| 16 |