Literature DB >> 22535934

Genomic comparison of Rickettsia helvetica and other Rickettsia species.

Xin Dong1, Khalid El Karkouri, Catherine Robert, Frédérick Gavory, Didier Raoult, Pierre-Edouard Fournier.   

Abstract

We report the complete and annotated genome sequence of Rickettsia helvetica strain C9P9, which was first isolated in 1979 from Ixodes ricinus ticks in Switzerland and is considered a human pathogen.

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Mesh：

Year:  2012        PMID： 22535934      PMCID： PMC3347184          DOI： 10.1128/JB.00299-12

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  9 in total

1.  AMIGene: Annotation of MIcrobial Genes.

Authors:  Stéphanie Bocs; Stéphane Cruveiller; David Vallenet; Grégory Nuel; Claudine Médigue
Journal:  Nucleic Acids Res       Date:  2003-07-01       Impact factor: 16.971

2.  Genome sequencing in microfabricated high-density picolitre reactors.

Authors:  Marcel Margulies; Michael Egholm; William E Altman; Said Attiya; Joel S Bader; Lisa A Bemben; Jan Berka; Michael S Braverman; Yi-Ju Chen; Zhoutao Chen; Scott B Dewell; Lei Du; Joseph M Fierro; Xavier V Gomes; Brian C Godwin; Wen He; Scott Helgesen; Chun Heen Ho; Chun He Ho; Gerard P Irzyk; Szilveszter C Jando; Maria L I Alenquer; Thomas P Jarvie; Kshama B Jirage; Jong-Bum Kim; James R Knight; Janna R Lanza; John H Leamon; Steven M Lefkowitz; Ming Lei; Jing Li; Kenton L Lohman; Hong Lu; Vinod B Makhijani; Keith E McDade; Michael P McKenna; Eugene W Myers; Elizabeth Nickerson; John R Nobile; Ramona Plant; Bernard P Puc; Michael T Ronan; George T Roth; Gary J Sarkis; Jan Fredrik Simons; John W Simpson; Maithreyan Srinivasan; Karrie R Tartaro; Alexander Tomasz; Kari A Vogt; Greg A Volkmer; Shally H Wang; Yong Wang; Michael P Weiner; Pengguang Yu; Richard F Begley; Jonathan M Rothberg
Journal:  Nature       Date:  2005-07-31       Impact factor: 49.962

3.  tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence.

Authors:  T M Lowe; S R Eddy
Journal:  Nucleic Acids Res       Date:  1997-03-01       Impact factor: 16.971

Review 4.  Gapped BLAST and PSI-BLAST: a new generation of protein database search programs.

Authors:  S F Altschul; T L Madden; A A Schäffer; J Zhang; Z Zhang; W Miller; D J Lipman
Journal:  Nucleic Acids Res       Date:  1997-09-01       Impact factor: 16.971

5.  The genome sequence of Rickettsia prowazekii and the origin of mitochondria.

Authors:  S G Andersson; A Zomorodipour; J O Andersson; T Sicheritz-Pontén; U C Alsmark; R M Podowski; A K Näslund; A S Eriksson; H H Winkler; C G Kurland
Journal:  Nature       Date:  1998-11-12       Impact factor: 49.962

6.  Lateral gene transfer between obligate intracellular bacteria: evidence from the Rickettsia massiliae genome.

Authors:  Guillaume Blanc; Hiroyuki Ogata; Catherine Robert; Stéphane Audic; Jean-Michel Claverie; Didier Raoult
Journal:  Genome Res       Date:  2007-10-04       Impact factor: 9.043

7.  OrthoMCL: identification of ortholog groups for eukaryotic genomes.

Authors:  Li Li; Christian J Stoeckert; David S Roos
Journal:  Genome Res       Date:  2003-09       Impact factor: 9.043

8.  The Pfam protein families database.

Authors:  Marco Punta; Penny C Coggill; Ruth Y Eberhardt; Jaina Mistry; John Tate; Chris Boursnell; Ningze Pang; Kristoffer Forslund; Goran Ceric; Jody Clements; Andreas Heger; Liisa Holm; Erik L L Sonnhammer; Sean R Eddy; Alex Bateman; Robert D Finn
Journal:  Nucleic Acids Res       Date:  2011-11-29       Impact factor: 16.971

9.  Reductive genome evolution from the mother of Rickettsia.

Authors:  Guillaume Blanc; Hiroyuki Ogata; Catherine Robert; Stéphane Audic; Karsten Suhre; Guy Vestris; Jean-Michel Claverie; Didier Raoult
Journal:  PLoS Genet       Date:  2007-01-19       Impact factor: 5.917
  9 in total
  3 in total

1.  The Wolbachia WO bacteriophage proteome in the Aedes albopictus C/wStr1 cell line: evidence for lytic activity?

Authors:  Gerald D Baldridge; Todd W Markowski; Bruce A Witthuhn; LeeAnn Higgins; Abigail S Baldridge; Ann M Fallon
Journal:  In Vitro Cell Dev Biol Anim       Date:  2015-10-01       Impact factor: 2.416

2.  Multi-omics Analysis Sheds Light on the Evolution and the Intracellular Lifestyle Strategies of Spotted Fever Group Rickettsia spp.

Authors:  Khalid El Karkouri; Malgorzata Kowalczewska; Nicholas Armstrong; Said Azza; Pierre-Edouard Fournier; Didier Raoult
Journal:  Front Microbiol       Date:  2017-07-20       Impact factor: 5.640

3.  Bacteriophage WO Can Mediate Horizontal Gene Transfer in Endosymbiotic Wolbachia Genomes.

Authors:  Guan H Wang; Bao F Sun; Tuan L Xiong; Yan K Wang; Kristen E Murfin; Jin H Xiao; Da W Huang
Journal:  Front Microbiol       Date:  2016-11-29       Impact factor: 5.640
  3 in total

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