Literature DB >> 22535406

Intra-specific genetic diversity in wild olives (Olea europaea ssp cuspidata) in Hormozgan Province, Iran.

Z Noormohammadi1, H Samadi-Molayousefi, M Sheidai.   

Abstract

Wild olive (O. europaea ssp cuspidata) plants grow in various regions of Iran and are expected to have considerable genetic diversity due to adaptation to the various environmental conditions. We examined the genetic diversity of four populations of wild olive growing in Hormozgan Province located in southern Iran by using 30 RAPDs and 10 ISSR markers. The mean value of polymorphism for RAPD loci was 73.71%, while the value for ISSR loci was 81.74%. The Keshar population had the highest value of intra-population polymorphism for both RAPD and ISSR loci (66.86 and 62.71%, respectively), while the Tudar population had the lowest values (20.35 and 28.81%, respectively). Similarly, the highest and lowest number of effective alleles, Shannon index and Nei's genetic diversity were also found for these two populations. The highest value of H(pop)/H(sp) within population genetic diversity for RAPD and ISSR loci was found for the Keshar population (H(pop) = 0.85 and H(sp) = 0.90). OPA04-750, OPA13-650 and OPA02-350 RAPD bands were specific for Tudar, Bondon and Keshar populations, respectively, while no specific ISSR bands were observed. Analysis of molecular variance as well as the pairwise F(ST) test showed significant differences for RAPD and ISSR markers among the populations. The NJ and UPGMA trees also separated the wild olive populations from each other, indicating their genetic distinctness. UPGMA clustering of the four wild olive populations placed the Tudar population far from the other populations; Keshar and Bokhoon population samples revealed more similarity and were grouped together. We conclude that there is high genetic diversity among O. europaea ssp cuspidata populations located in southern Iran. We also found RAPD and ISSR markers to be useful molecular tools to discriminate and evaluate genetic variations in wild olive trees.

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Year:  2012        PMID: 22535406     DOI: 10.4238/2012.March.19.4

Source DB:  PubMed          Journal:  Genet Mol Res        ISSN: 1676-5680


  3 in total

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Authors:  Masood Ghasemi Ghehsareh; Hassan Salehi; Morteza Khosh-Khui; Ali Niazi
Journal:  Mol Biotechnol       Date:  2015-01       Impact factor: 2.695

2.  Machine Learning Based Classification of Microsatellite Variation: An Effective Approach for Phylogeographic Characterization of Olive Populations.

Authors:  Bahareh Torkzaban; Amir Hossein Kayvanjoo; Arman Ardalan; Soraya Mousavi; Roberto Mariotti; Luciana Baldoni; Esmaeil Ebrahimie; Mansour Ebrahimi; Mehdi Hosseini-Mazinani
Journal:  PLoS One       Date:  2015-11-24       Impact factor: 3.240

3.  High genetic diversity detected in olives beyond the boundaries of the Mediterranean Sea.

Authors:  Mehdi Hosseini-Mazinani; Roberto Mariotti; Bahareh Torkzaban; Massoma Sheikh-Hassani; Saeedeh Ataei; Nicolò G M Cultrera; Saverio Pandolfi; Luciana Baldoni
Journal:  PLoS One       Date:  2014-04-07       Impact factor: 3.240

  3 in total

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