Literature DB >> 22523346

Isolation and characterization of 10 SSR markers of Momordica charantia (Cucurbitaceae).

Da-Long Guo1, Ju-Ping Zhang, Yi-Min Xue, Xiao-Gai Hou.   

Abstract

PREMISE OF THE STUDY: Microsatellite markers were isolated and characterized from the genome of Momordica charantia (bitter melon) to be applied in studies of genetic diversity and population structure. METHODS AND
RESULTS: Twenty-five microsatellite loci were isolated from the genome of bitter melon using the Fast Isolation by AFLP of Sequences COntaining Repeats (FIASCO) method. Ten loci were polymorphic, and the number of alleles per locus ranged from three to seven, with the observed heterozygosity ranging from 0.46 to 0.65. The markers also amplified successfully in the related species M. cochinchinensis and Cucurbita pepo.
CONCLUSIONS: These markers will have potential utility for applications in genetic diversity evaluation, molecular fingerprinting, identification, comparative genomics analysis, and genetic mapping in Momordica species, as well as in C. pepo.

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Year:  2012        PMID: 22523346     DOI: 10.3732/ajb.1100277

Source DB:  PubMed          Journal:  Am J Bot        ISSN: 0002-9122            Impact factor:   3.844


  5 in total

1.  De Novo Assembly of Bitter Gourd Transcriptomes: Gene Expression and Sequence Variations in Gynoecious and Monoecious Lines.

Authors:  Anjali Shukla; V K Singh; D R Bharadwaj; Rajesh Kumar; Ashutosh Rai; A K Rai; Raja Mugasimangalam; Sriram Parameswaran; Major Singh; P S Naik
Journal:  PLoS One       Date:  2015-06-05       Impact factor: 3.240

2.  Genome-Wide Analysis of Simple Sequence Repeats in Bitter Gourd (Momordica charantia).

Authors:  Junjie Cui; Jiaowen Cheng; Dingguo Nong; Jiazhu Peng; Yafei Hu; Weiming He; Qianjun Zhou; Narinder P S Dhillon; Kailin Hu
Journal:  Front Plant Sci       Date:  2017-06-22       Impact factor: 5.753

3.  Mapping and QTL Analysis of Gynoecy and Earliness in Bitter Gourd (Momordica charantia L.) Using Genotyping-by-Sequencing (GBS) Technology.

Authors:  P Gangadhara Rao; Tusar Kanti Behera; Ambika B Gaikwad; Anilabh Das Munshi; Gograj Singh Jat; G Boopalakrishnan
Journal:  Front Plant Sci       Date:  2018-10-31       Impact factor: 5.753

4.  Genetic analysis and QTL mapping of yield and fruit traits in bitter gourd (Momordica charantia L.).

Authors:  P Gangadhara Rao; T K Behera; Ambika B Gaikwad; A D Munshi; Arpita Srivastava; G Boopalakrishnan
Journal:  Sci Rep       Date:  2021-02-18       Impact factor: 4.379

5.  Mapping of the gynoecy in bitter gourd (Momordica charantia) using RAD-seq analysis.

Authors:  Hideo Matsumura; Norimichi Miyagi; Naoki Taniai; Mai Fukushima; Kazuhiko Tarora; Ayano Shudo; Naoya Urasaki
Journal:  PLoS One       Date:  2014-01-30       Impact factor: 3.240

  5 in total

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