| Literature DB >> 22522150 |
Szu-Chieh Chen1, Shu-Han You, Min-Pei Ling, Chia-Pin Chio, Chung-Min Liao.
Abstract
BACKGROUND: We linked viral titers and respiratory symptom scores for seasonal influenza to estimate the effective contact rate among schoolchildren.Entities:
Mesh:
Year: 2012 PMID: 22522150 PMCID: PMC3798655 DOI: 10.2188/jea.je20110146
Source DB: PubMed Journal: J Epidemiol ISSN: 0917-5040 Impact factor: 3.211
Figure 1.Research flowchart and study algorithm.
Characteristics of participants and questionnaire responses (mean ± SD)a
| No. of participants (%) | No. of contacts | |
| Sex | ||
| Male | 65 (47.45) | 10.35 (8.59) |
| Female | 72 (52.55) | 9.99 (7.68) |
| School grade | ||
| Grade 7 | 41 (29.93) | 11.18 (7.98) |
| Grade 8 | 44 (32.12) | 10.03 (7.54) |
| Grade 9 | 52 (37.96) | 9.44 (8.68) |
| Household size | ||
| 2 | 1 (0.73) | 4.5 (NA)b |
| 3 | 13 (9.49) | 7.35 (5.66) |
| 4 | 65 (47.45) | 11.15 (8.93) |
| 5 | 29 (21.17) | 10.94 (6.92) |
| >5 | 29 (21.17) | 9.07 (8.1) |
| Day of the week | ||
| Monday | 23 (16.79) | 11.70 (9.49) |
| Tuesday | 27 (19.71) | 10.63 (7.00) |
| Wednesday | 26 (18.98) | 11.65 (9.05) |
| Thursday | 34 (24.82) | 13.32 (6.85) |
| Friday | 27 (19.71) | 12.82 (10.14) |
| Saturday | 62 (45.26) | 8.46 (10.41) |
| Sunday | 75 (54.74) | 8.20 (5.49) |
| Health statusc | ||
| Healthy | 225 (82.12) | 10.55 (8.62) |
| 1 symptom | 30 (10.95) | 7.10 (3.66) |
| 2 symptoms | 16 (5.84) | 11.44 (5.72) |
| ≥3 symptoms | 3 (1.09) | 4.67 (2.89) |
aTotal sample size of questionnaire = 404; effective sample size = 274: 39 questionnaires were not returned, 49 had incomplete data (missing sampling date or basic individual information) and 42 questionnaires had information for only 1 of 2 required days.
bNot available.
cHealthy, coughing, runny nose, headache, sneezing, and fever.
Figure 2.Analysis of data from the questionnaire survey. Total number of contacts (per day) by estimated contact age (ie, 0–5, 6–12, 13–19, 20–39, 40–59, ≥60 years) and variation in contact duration for (A) level 1 and (B) level 2 contacts. (C–D) Contact frequencies (daily, 1–2 times a week, 1–2 times a month, <1 time a month, first time) by total number of contacts (per day) are shown for the 5 age groups (0–5, 6–12, 13–19, 20–39, 40–59, ≥60 years).
Figure 3.Frequency distribution of number of contacts as reported on questionnaires distributed in a junior high school in Jhongli City, Taiyuan County, Taiwan in March 2010. The histogram of the contacts and fitting curve show the survey data and optimal distribution, respectively. There were 274 effective sample sizes with 2804 recorded contacts (range, 0–49 per day).
Figure 4.Effective contact rates for grades 7–9. The process was divided into 3 steps. First, the frequency distribution of the number of contacts (B, E, and H) for grades 7–9 was quantified by using the questionnaire data. The scale of the x-axis is subdivided into 15 subgroups (0–70 contacts), with an interval of 5 contacts. Second, box-whisker plots of the number of contacts were drawn and show the 5%–95% and 25%–75% percentile distributions for number of contacts (C, F, and I). Third, we calculated the frequencies of effective contact rates (A, D, and G) for grades 7–9 by multiplying the number of daily contacts by the transmission probability. A Monte Carlo simulation was used to analyze the probability distribution of transmission and number of daily contacts.
Analysis of parameter estimates based on best-fit Poisson regression models for all variances
| Parameters | DF | Estimate | Standard error | Wald 95% confidence limits | Chi-square | Pr > ChiSq | |
| Intercept | 1 | 2.3355 | 0.0935 | 2.1522 | 2.5187 | 624.15 | <0.0001 |
| Estimated contact age | 1 | −0.0738 | 0.0185 | −0.1100 | −0.0376 | 15.98 | <0.0001 |
| Household size | 1 | 0.0775 | 0.0271 | 0.0243 | 0.1307 | 8.15 | 0.0043 |
| Contact duration | 1 | 0.0796 | 0.0270 | −0.1100 | 0.1326 | 8.66 | 0.0033 |
| Contact frequency | 1 | 0.1221 | 0.0330 | 0.0574 | 0.1869 | 13.67 | 0.0002 |
Abbreviation: DF, degrees of freedom.
Daily viral titers and symptom scores for upper respiratory, lower respiratory, and systemic symptoms
| Days post-infection | Viral titer | Symptom scoresa | |||
| Upper respiratory symptom scoreb | Lower respiratory symptom scorec | Systemic symptom scored | Total symptom scoree | ||
| Hayden et al[ | |||||
| 0 | 0 | 0.62 | 0.06 | 0.32 | 1 |
| 1 | 1.9 | 1.13 | 0.21 | 0.45 | 1.79 |
| 2 | 3.7 | 3.18 | 0.47 | 2.41 | 6.06 |
| 3 | 3.3 | 2.94 | 0.47 | 1.24 | 4.65 |
| 4 | 2.6 | 2.57 | 0.45 | 0.76 | 3.78 |
| 5 | 2.5 | 1.52 | 0.62 | 0.84 | 2.98 |
| 6 | 1.3 | 0.9 | 0.47 | 0.52 | 1.89 |
| 7 | 0.8 | 0.65 | 0.32 | 0.1 | 1.07 |
| Fritz et al[ | |||||
| 0 | 0 | 0.2 | 0.27 | 0.6 | 1.07 |
| 1 | 1.6 | 1.43 | 0.21 | 0.94 | 2.58 |
| 2 | 2.8 | 3.9 | 0.43 | 2.67 | 7 |
| 3 | 2.2 | 3.9 | 0.77 | 2 | 6.67 |
| 4 | 1.8 | 2.3 | 0.55 | 1.2 | 4.05 |
| 5 | 0.6 | 1.8 | 0.34 | 0.63 | 2.77 |
| 6 | 0.2 | 1.15 | 0.27 | 0.57 | 1.99 |
| 7 | 0.3 | 0.7 | 0.22 | 0.46 | 1.38 |
aSymptom assessments were conducted twice a day for volunteers, using a 4-point scale for specific symptoms (0–3 from absent to severe).[18],[21]
bNasal stuffiness, earache/pressure, runny nose, sore throat, hoarseness, and sneezing.
cCoughing, breathing difficulty, hoarseness, and chest discomfort.
dMuscle aches, fatigue, headache, and fever.
eTotal symptom scores for upper respiratory, lower respiratory, and systemic symptoms.
Figure 5.Data from peer-reviewed experimental human studies of the relationship between virus titer and total symptom score (TSS). (A) Time-dependent TSS by days post-infection, adopted from Hayden et al[18] and Fritz et al.[21] The time-dependent TSS can be expressed as: , with a logistic function curve (R2 = 0.84). (B) The time-dependent viral titer can be expressed as , with a logistic function curve (R2 = 0.70). (C) The best-fitted curve describing the relationship between virus titers and TSS.
Relationship between daily viral titer, total symptom score, and normalized contact rate
| Days since illness onset ( | Viral titer | Total symptoms | Normalized |
| 1 | 2.81 | 5.14 | 0.16 |
| 2 | 3.13 | 5.55 | 0.15 |
| 3 | 1.57 | 2.82 | 0.26 |
| 4 | 0.84 | 1.83 | 0.35 |
| 5 | 0.66 | 1.65 | 0.38 |
| 6 | 0.63 | 1.62 | 0.38 |
| 7 | 0.62 | 1.62 | 0.38 |
| 8 | 0.62 | 0.66 | 0.60 |
aViral titers for children were taken from Cowling et al.[25] The time-dependent viral titers for children can be expressed as:
bThe total symptom score for children was estimated by integrating the viral titer of children with the relationship between virus titer and symptom score. Hence, the time-dependent total symptom score of children can be expressed as:
cEstimated by the equation .
Figure 6.Relationship of contact rate, respiratory symptom score, and virus titers. (A) Viral titers of seasonal influenza at days since illness onset for adolescent (age, <16 years) participants.[25] (B) The response surface shows the relationship between daily viral titer, TSS, and normalized contact rate among children.