Literature DB >> 22521614

Subcellular localization of RNA and proteins in prokaryotes.

Keren Nevo-Dinur1, Sutharsan Govindarajan, Orna Amster-Choder.   

Abstract

The field of bacterial cell biology has been revolutionized in the last decade by improvements in imaging capabilities which have revealed that bacterial cells, previously thought to be non-compartmentalized, possess an intricate higher-order organization. Many bacterial proteins localize to specific subcellular domains and regulate the spatial deployment of other proteins, DNA and lipids. Recently, the surprising discovery was made that bacterial RNA molecules are also specifically localized. However, the mechanisms that underlie bacterial cell architecture are just starting to be unraveled. The limited number of distribution patterns observed thus far for bacterial proteins and RNAs, and the similarity between the patterns exhibited by these macromolecules, suggest that the processes that underlie their localization are inextricably linked. We discuss these spatial arrangements and the insights that they provide on processes, such as localized translation, protein complex formation, and crosstalk between bacterial machineries.
Copyright © 2012 Elsevier Ltd. All rights reserved.

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Year:  2012        PMID: 22521614     DOI: 10.1016/j.tig.2012.03.008

Source DB:  PubMed          Journal:  Trends Genet        ISSN: 0168-9525            Impact factor:   11.639


  24 in total

Review 1.  RNA localization in bacteria.

Authors:  Avi-ad Avraam Buskila; Shanmugapriya Kannaiah; Orna Amster-Choder
Journal:  RNA Biol       Date:  2014-10-31       Impact factor: 4.652

2.  The price of tags in protein localization studies.

Authors:  William Margolin
Journal:  J Bacteriol       Date:  2012-09-07       Impact factor: 3.490

3.  Dynamic localization of a transcription factor in Bacillus subtilis: the LicT antiterminator relocalizes in response to inducer availability.

Authors:  Fabian M Rothe; Christoph Wrede; Martin Lehnik-Habrink; Boris Görke; Jörg Stülke
Journal:  J Bacteriol       Date:  2013-03-08       Impact factor: 3.490

Review 4.  Bioanalysis of eukaryotic organelles.

Authors:  Chad P Satori; Michelle M Henderson; Elyse A Krautkramer; Vratislav Kostal; Mark D Distefano; Mark M Distefano; Edgar A Arriaga
Journal:  Chem Rev       Date:  2013-04-10       Impact factor: 60.622

Review 5.  RNA Localization in Bacteria.

Authors:  Jingyi Fei; Cynthia M Sharma
Journal:  Microbiol Spectr       Date:  2018-09

Review 6.  RNA-based mechanisms of virulence control in Enterobacteriaceae.

Authors:  Ann Kathrin Heroven; Aaron M Nuss; Petra Dersch
Journal:  RNA Biol       Date:  2016-07-21       Impact factor: 4.652

7.  Bacterial scaffold directs pole-specific centromere segregation.

Authors:  Jerod L Ptacin; Andreas Gahlmann; Grant R Bowman; Adam M Perez; Lexy von Diezmann; Michael R Eckart; W E Moerner; Lucy Shapiro
Journal:  Proc Natl Acad Sci U S A       Date:  2014-04-28       Impact factor: 11.205

8.  Biogenic membranes of the chloroplast in Chlamydomonas reinhardtii.

Authors:  Marco Schottkowski; Matthew Peters; Yu Zhan; Oussama Rifai; Ying Zhang; William Zerges
Journal:  Proc Natl Acad Sci U S A       Date:  2012-11-05       Impact factor: 11.205

9.  Comprehensive identification of RNA-protein interactions in any organism using orthogonal organic phase separation (OOPS).

Authors:  Rayner M L Queiroz; Tom Smith; Eneko Villanueva; Maria Marti-Solano; Mie Monti; Mariavittoria Pizzinga; Dan-Mircea Mirea; Manasa Ramakrishna; Robert F Harvey; Veronica Dezi; Gavin H Thomas; Anne E Willis; Kathryn S Lilley
Journal:  Nat Biotechnol       Date:  2019-01-03       Impact factor: 54.908

10.  VirB, a key transcriptional regulator of virulence plasmid genes in Shigella flexneri, forms DNA-binding site dependent foci in the bacterial cytoplasm.

Authors:  Jillian N Socea; Grant R Bowman; Helen J Wing
Journal:  J Bacteriol       Date:  2021-03-15       Impact factor: 3.490

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