Literature DB >> 22513284

Positive selection on the gene RNASEL: correlation between patterns of evolution and function.

Wei Jin1, Dong-Dong Wu, Xin Zhang, David M Irwin, Ya-Ping Zhang.   

Abstract

RNASEL is a 2-5A-dependent endoribonuclease that is a component of the interferon-induced 2-5A system, which plays a crucial role in the antiviral and apoptotic activities of interferons. In humans, many polymorphic sites within the RNASEL gene have been associated with an increased risk of developing prostate cancer. Here, we obtained coding sequences for the RNASEL gene from 11 primates and found evidence that positive selection has operated on the C-terminal endoribonuclease domain and the N-terminal ankyrin repeats domain of the protein, domains that directly interact with virus (i.e., ankyrin repeats are responsible for receiving environmental signals, and the endoribonuclease catalyses the destruction of the pathogenic viral RNA). To extend this finding, we studied variation within this gene in modern human populations by resequencing alleles from 144 individuals representing four separate populations. Interestingly, the frequency of the 541D allele shows a negative association with the incidence rate of prostate cancer in worldwide populations, and haplotypes containing the 541D polymorphisms demonstrate signatures of positive selection. RNASEL variants having the 541D haplotype likely have a greater ability to defend against infections by viruses, thus the loss of this activity may be associated with the development of prostate cancer. We provide evidence that positive selection has operated on the RNASEL gene, and its evolution is correlated with its function in pathogen defense and cancer association.

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Year:  2012        PMID: 22513284     DOI: 10.1093/molbev/mss123

Source DB:  PubMed          Journal:  Mol Biol Evol        ISSN: 0737-4038            Impact factor:   16.240


  7 in total

1.  Gene panel model predictive of outcome in patients with prostate cancer.

Authors:  Nadège Rabiau; Yann Dantal; Laurent Guy; Marjolaine Ngollo; Aslihan Dagdemir; Jean-Louis Kemeny; Benoît Terris; Annick Vieillefond; Jean-Paul Boiteux; Yves-Jean Bignon; Dominique Bernard-Gallon
Journal:  OMICS       Date:  2013-06-11

2.  Genetic variability and evolutionary diversification of membrane ABC transporters in plants.

Authors:  Giuseppe Andolfo; Michelina Ruocco; Antimo Di Donato; Luigi Frusciante; Matteo Lorito; Felice Scala; Maria Raffaella Ercolano
Journal:  BMC Plant Biol       Date:  2015-02-13       Impact factor: 4.215

3.  IRF1 Maintains Optimal Constitutive Expression of Antiviral Genes and Regulates the Early Antiviral Response.

Authors:  Debasis Panda; Erisa Gjinaj; Mahesh Bachu; Erica Squire; Hilary Novatt; Keiko Ozato; Ronald L Rabin
Journal:  Front Immunol       Date:  2019-05-15       Impact factor: 7.561

4.  Positive natural selection in primate genes of the type I interferon response.

Authors:  Elena N Judd; Alison R Gilchrist; Nicholas R Meyerson; Sara L Sawyer
Journal:  BMC Ecol Evol       Date:  2021-04-26

5.  In Vitro Assessment of the Inflammatory Breast Cancer Cell Line SUM 149: Discovery of 2 Single Nucleotide Polymorphisms in the RNase L Gene.

Authors:  Brandon T Nokes; Heather E Cunliffe; Bonnie Lafleur; David W Mount; Robert B Livingston; Bernard W Futscher; Julie E Lang
Journal:  J Cancer       Date:  2013-01-10       Impact factor: 4.207

6.  OASes and STING: adaptive evolution in concert.

Authors:  Alessandra Mozzi; Chiara Pontremoli; Diego Forni; Mario Clerici; Uberto Pozzoli; Nereo Bresolin; Rachele Cagliani; Manuela Sironi
Journal:  Genome Biol Evol       Date:  2015-03-09       Impact factor: 3.416

7.  Patterns of positive selection of the myogenic regulatory factor gene family in vertebrates.

Authors:  Xiao Zhao; Qi Yu; Ling Huang; Qing-Xin Liu
Journal:  PLoS One       Date:  2014-03-20       Impact factor: 3.240

  7 in total

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