Literature DB >> 22508721

RNAi in fission yeast finds new targets and new ways of targeting at the nuclear periphery.

Daniel Holoch1, Danesh Moazed.   

Abstract

RNAi in Schizosaccharomyces pombe is critical for centromeric heterochromatin formation. It has remained unclear, however, whether RNAi also regulates the expression of protein-coding loci. In the April 1, 2012, issue of Genes & Development, Woolcock and colleagues (pp. 683-667) reported an elegant mechanism for the conditional RNAi-mediated repression of stress response genes involving association with Dcr1 at the nuclear pore. Unexpectedly, the initial targeting of RNAi components to these genes does not require small RNA guides.

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Year:  2012        PMID: 22508721      PMCID: PMC3337448          DOI: 10.1101/gad.191155.112

Source DB:  PubMed          Journal:  Genes Dev        ISSN: 0890-9369            Impact factor:   11.361


  33 in total

1.  Transcription and RNAi in heterochromatic gene silencing.

Authors:  Marc Bühler; Danesh Moazed
Journal:  Nat Struct Mol Biol       Date:  2007-11-05       Impact factor: 15.369

2.  RNAi keeps Atf1-bound stress response genes in check at nuclear pores.

Authors:  Katrina J Woolcock; Rieka Stunnenberg; Dimos Gaidatzis; Hans-Rudolf Hotz; Stephan Emmerth; Pierre Barraud; Marc Bühler
Journal:  Genes Dev       Date:  2012-03-19       Impact factor: 11.361

3.  The Tetrahymena argonaute-binding protein Giw1p directs a mature argonaute-siRNA complex to the nucleus.

Authors:  Tomoko Noto; Henriette M Kurth; Kensuke Kataoka; Lucia Aronica; Leroi V DeSouza; K W Michael Siu; Ronald E Pearlman; Martin A Gorovsky; Kazufumi Mochizuki
Journal:  Cell       Date:  2010-03-05       Impact factor: 41.582

4.  Autoregulation of convergent RNAi genes in fission yeast.

Authors:  Monika Gullerova; Danesh Moazed; Nick J Proudfoot
Journal:  Genes Dev       Date:  2011-02-28       Impact factor: 11.361

5.  Dicer associates with chromatin to repress genome activity in Schizosaccharomyces pombe.

Authors:  Katrina J Woolcock; Dimos Gaidatzis; Tanel Punga; Marc Bühler
Journal:  Nat Struct Mol Biol       Date:  2010-12-12       Impact factor: 15.369

Review 6.  Common ground: small RNA programming and chromatin modifications.

Authors:  Erwan Lejeune; Robin C Allshire
Journal:  Curr Opin Cell Biol       Date:  2011-04-07       Impact factor: 8.382

Review 7.  The many faces of RNAi.

Authors:  René F Ketting
Journal:  Dev Cell       Date:  2011-02-15       Impact factor: 12.270

8.  Small regulatory RNAs inhibit RNA polymerase II during the elongation phase of transcription.

Authors:  Shouhong Guang; Aaron F Bochner; Kirk B Burkhart; Nick Burton; Derek M Pavelec; Scott Kennedy
Journal:  Nature       Date:  2010-06-13       Impact factor: 49.962

9.  The methyltransferase activity of Clr4Suv39h triggers RNAi independently of histone H3K9 methylation.

Authors:  Erica L Gerace; Mario Halic; Danesh Moazed
Journal:  Mol Cell       Date:  2010-08-13       Impact factor: 17.970

10.  An extended dsRBD with a novel zinc-binding motif mediates nuclear retention of fission yeast Dicer.

Authors:  Pierre Barraud; Stephan Emmerth; Yukiko Shimada; Hans-Rudolf Hotz; Frédéric H-T Allain; Marc Bühler
Journal:  EMBO J       Date:  2011-08-16       Impact factor: 11.598

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  4 in total

1.  NRDE-2, the human homolog of fission yeast Nrl1, prevents DNA damage accumulation in human cells.

Authors:  Patricia Richard; Koichi Ogami; Yaqiong Chen; Shuang Feng; James J Moresco; John R Yates; James L Manley
Journal:  RNA Biol       Date:  2018-08-02       Impact factor: 4.652

Review 2.  Eri1: a conserved enzyme at the crossroads of multiple RNA-processing pathways.

Authors:  Molly F Thomas; Noelle D L'Etoile; K Mark Ansel
Journal:  Trends Genet       Date:  2014-06-12       Impact factor: 11.639

3.  Two sets of RNAi components are required for heterochromatin formation in trans triggered by truncated transgenes.

Authors:  Ulrike Götz; Simone Marker; Miriam Cheaib; Karsten Andresen; Simon Shrestha; Dilip A Durai; Karl J Nordström; Marcel H Schulz; Martin Simon
Journal:  Nucleic Acids Res       Date:  2016-04-16       Impact factor: 16.971

4.  RNA fate determination through cotranscriptional adenosine methylation and microprocessor binding.

Authors:  Philip Knuckles; Sarah H Carl; Michael Musheev; Christof Niehrs; Alice Wenger; Marc Bühler
Journal:  Nat Struct Mol Biol       Date:  2017-06-05       Impact factor: 15.369

  4 in total

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