Literature DB >> 22505723

Urine metabolomics analysis for biomarker discovery and detection of jaundice syndrome in patients with liver disease.

Xijun Wang1, Aihua Zhang, Ying Han, Ping Wang, Hui Sun, Gaochen Song, Tianwei Dong, Ye Yuan, Xiaoxia Yuan, Miao Zhang, Ning Xie, He Zhang, Hui Dong, Wei Dong.   

Abstract

Metabolomics is a powerful new technology that allows for the assessment of global metabolic profiles in easily accessible biofluids and biomarker discovery in order to distinguish between diseased and nondiseased status information. Deciphering the molecular networks that distinguish diseases may lead to the identification of critical biomarkers for disease aggressiveness. However, current diagnostic methods cannot predict typical Jaundice syndrome (JS) in patients with liver disease and little is known about the global metabolomic alterations that characterize JS progression. Emerging metabolomics provides a powerful platform for discovering novel biomarkers and biochemical pathways to improve diagnostic, prognostication, and therapy. Therefore, the aim of this study is to find the potential biomarkers from JS disease by using a nontarget metabolomics method, and test their usefulness in human JS diagnosis. Multivariate data analysis methods were utilized to identify the potential biomarkers. Interestingly, 44 marker metabolites contributing to the complete separation of JS from matched healthy controls were identified. Metabolic pathways (Impact-value≥0.10) including alanine, aspartate, and glutamate metabolism and synthesis and degradation of ketone bodies were found to be disturbed in JS patients. This study demonstrates the possibilities of metabolomics as a diagnostic tool in diseases and provides new insight into pathophysiologic mechanisms.

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Year:  2012        PMID: 22505723      PMCID: PMC3412968          DOI: 10.1074/mcp.M111.016006

Source DB:  PubMed          Journal:  Mol Cell Proteomics        ISSN: 1535-9476            Impact factor:   5.911


  32 in total

1.  High-resolution magic-angle-spinning NMR spectroscopy for metabolic profiling of intact tissues.

Authors:  Olaf Beckonert; Muireann Coen; Hector C Keun; Yulan Wang; Timothy M D Ebbels; Elaine Holmes; John C Lindon; Jeremy K Nicholson
Journal:  Nat Protoc       Date:  2010-05-13       Impact factor: 13.491

2.  Case records of the Massachusetts General Hospital. Case 39-2010. A 19-year-old woman with nausea, jaundice, and pruritus.

Authors:  Lawrence S Friedman; Michael S Gee; Joseph Misdraji
Journal:  N Engl J Med       Date:  2010-12-23       Impact factor: 91.245

3.  Systems biology: Metabonomics.

Authors:  Jeremy K Nicholson; John C Lindon
Journal:  Nature       Date:  2008-10-23       Impact factor: 49.962

4.  Optimized preprocessing of ultra-performance liquid chromatography/mass spectrometry urinary metabolic profiles for improved information recovery.

Authors:  Kirill A Veselkov; Lisa K Vingara; Perrine Masson; Steven L Robinette; Elizabeth Want; Jia V Li; Richard H Barton; Claire Boursier-Neyret; Bernard Walther; Timothy M Ebbels; István Pelczer; Elaine Holmes; John C Lindon; Jeremy K Nicholson
Journal:  Anal Chem       Date:  2011-07-05       Impact factor: 6.986

5.  Bladder cancer determination via two urinary metabolites: a biomarker pattern approach.

Authors:  Zhenzhen Huang; Lin Lin; Yao Gao; Yongjing Chen; Xiaomei Yan; Jinchun Xing; Wei Hang
Journal:  Mol Cell Proteomics       Date:  2011-07-28       Impact factor: 5.911

6.  Quantitative proteomics and metabolomics analysis of normal human cerebrospinal fluid samples.

Authors:  Marcel P Stoop; Leon Coulier; Therese Rosenling; Shanna Shi; Agnieszka M Smolinska; Lutgarde Buydens; Kirsten Ampt; Christoph Stingl; Adrie Dane; Bas Muilwijk; Ronald L Luitwieler; Peter A E Sillevis Smitt; Rogier Q Hintzen; Rainer Bischoff; Sybren S Wijmenga; Thomas Hankemeier; Alain J van Gool; Theo M Luider
Journal:  Mol Cell Proteomics       Date:  2010-09       Impact factor: 5.911

7.  Structural basis for the neutralization and genotype specificity of hepatitis E virus.

Authors:  Xuhua Tang; Chunyan Yang; Ying Gu; Cuiling Song; Xiao Zhang; Yingbin Wang; Jun Zhang; Choy Leong Hew; Shaowei Li; Ningshao Xia; J Sivaraman
Journal:  Proc Natl Acad Sci U S A       Date:  2011-06-03       Impact factor: 11.205

8.  UPLC-MS-based urine metabolomics reveals indole-3-lactic acid and phenyllactic acid as conserved biomarkers for alcohol-induced liver disease in the Ppara-null mouse model.

Authors:  Soumen K Manna; Andrew D Patterson; Qian Yang; Kristopher W Krausz; Jeffrey R Idle; Albert J Fornace; Frank J Gonzalez
Journal:  J Proteome Res       Date:  2011-07-28       Impact factor: 4.466

9.  Metabolomic profiles delineate potential role for sarcosine in prostate cancer progression.

Authors:  Arun Sreekumar; Laila M Poisson; Thekkelnaycke M Rajendiran; Amjad P Khan; Qi Cao; Jindan Yu; Bharathi Laxman; Rohit Mehra; Robert J Lonigro; Yong Li; Mukesh K Nyati; Aarif Ahsan; Shanker Kalyana-Sundaram; Bo Han; Xuhong Cao; Jaeman Byun; Gilbert S Omenn; Debashis Ghosh; Subramaniam Pennathur; Danny C Alexander; Alvin Berger; Jeffrey R Shuster; John T Wei; Sooryanarayana Varambally; Christopher Beecher; Arul M Chinnaiyan
Journal:  Nature       Date:  2009-02-12       Impact factor: 49.962

10.  A metabonomic investigation on the biochemical perturbation in liver failure patients caused by hepatitis B virus.

Authors:  Ke Yu; Guoping Sheng; Jifang Sheng; Yuemei Chen; Wei Xu; Xiaoli Liu; Hongcui Cao; Haibin Qu; Yiyu Cheng; Lanjuan Li
Journal:  J Proteome Res       Date:  2007-06-01       Impact factor: 4.466

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  72 in total

Review 1.  Cell metabolomics.

Authors:  Aihua Zhang; Hui Sun; Hongying Xu; Shi Qiu; Xijun Wang
Journal:  OMICS       Date:  2013-08-29

2.  Metabolomics study of type 2 diabetes using ultra-performance LC-ESI/quadrupole-TOF high-definition MS coupled with pattern recognition methods.

Authors:  Ai-hua Zhang; Hui Sun; Guang-li Yan; Ye Yuan; Ying Han; Xi-jun Wang
Journal:  J Physiol Biochem       Date:  2013-08-24       Impact factor: 4.158

3.  Statistical analysis of multi-dimensional, temporal gene expression of stem cells to elucidate colony size-dependent neural differentiation.

Authors:  Ramila Joshi; Brendan Fuller; Jun Li; Hossein Tavana
Journal:  Mol Omics       Date:  2018-04-16

4.  An integrated metabonomic and proteomic study on Kidney-Yin Deficiency Syndrome patients with diabetes mellitus in China.

Authors:  Ning Jiang; Hong-fang Liu; Si-di Li; Wen-xia Zhou; Yong-xiang Zhang; Qi Zhang; Xian-zhong Yan
Journal:  Acta Pharmacol Sin       Date:  2015-05-04       Impact factor: 6.150

5.  Simultaneous Improvement in the Precision, Accuracy, and Robustness of Label-free Proteome Quantification by Optimizing Data Manipulation Chains.

Authors:  Jing Tang; Jianbo Fu; Yunxia Wang; Yongchao Luo; Qingxia Yang; Bo Li; Gao Tu; Jiajun Hong; Xuejiao Cui; Yuzong Chen; Lixia Yao; Weiwei Xue; Feng Zhu
Journal:  Mol Cell Proteomics       Date:  2019-05-16       Impact factor: 5.911

6.  Non-invasive urinary metabolomic profiles discriminate biliary atresia from infantile hepatitis syndrome.

Authors:  Wei-Wei Li; Yan Yang; Qi-Gang Dai; Li-Li Lin; Tong Xie; Li-Li He; Jia-Lei Tao; Jin-Jun Shan; Shou-Chuan Wang
Journal:  Metabolomics       Date:  2018-06-21       Impact factor: 4.290

7.  Comparative analysis of creatinine and osmolality as urine normalization strategies in targeted metabolomics for the differential diagnosis of asthma and COPD.

Authors:  Mona M Khamis; Teagan Holt; Hanan Awad; Anas El-Aneed; Darryl J Adamko
Journal:  Metabolomics       Date:  2018-08-29       Impact factor: 4.290

8.  Novel Allosteric Pathway of Eg5 Regulation Identified through Multivariate Statistical Analysis of Hydrogen-Exchange Mass Spectrometry (HX-MS) Ligand Screening Data.

Authors:  Joey G Sheff; Farshad Farshidfar; Oliver F Bathe; Karen Kopciuk; Francesco Gentile; Jack Tuszynski; Khaled Barakat; David C Schriemer
Journal:  Mol Cell Proteomics       Date:  2017-01-05       Impact factor: 5.911

Review 9.  Metabolomics insights into pathophysiological mechanisms of nephrology.

Authors:  Aihua Zhang; Hui Sun; Shi Qiu; Xijun Wang
Journal:  Int Urol Nephrol       Date:  2013-11-12       Impact factor: 2.370

10.  Application of (1)h NMR spectroscopy-based metabolomics to sera of tuberculosis patients.

Authors:  Aiping Zhou; Jinjing Ni; Zhihong Xu; Ying Wang; Shuihua Lu; Wei Sha; Petros C Karakousis; Yu-Feng Yao
Journal:  J Proteome Res       Date:  2013-09-10       Impact factor: 4.466

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