Literature DB >> 22505428

Purification, crystallization and preliminary X-ray analysis of OsAREB8 from rice, a member of the AREB/ABF family of bZIP transcription factors, in complex with its cognate DNA.

Ken-ichi Miyazono1, Tsubasa Koura, Keiko Kubota, Takuya Yoshida, Yasunari Fujita, Kazuko Yamaguchi-Shinozaki, Masaru Tanokura.   

Abstract

The AREB/ABF family of bZIP transcription factors play a key role in drought stress response and tolerance during the vegetative stage in plants. To reveal the DNA-recognition mechanism of the AREB/ABF family of proteins, the bZIP domain of OsAREB8, an AREB/ABF-family protein from Oryza sativa, was expressed in Escherichia coli, purified and crystallized with its cognate DNA. Crystals of the OsAREB8-DNA complex were obtained by the sitting-drop vapour-diffusion method at 277 K with a reservoir solution consisting of 50 mM MES pH 6.4, 29% MPD, 2 mM spermidine, 20 mM magnesium acetate and 100 mM sodium chloride. A crystal diffracted X-rays to 3.65 Å resolution and belonged to space group C222, with unit-cell parameters a = 155.1, b = 206.7, c = 38.5 Å. The crystal contained one OsAREB8-DNA complex in the asymmetric unit.
© 2012 International Union of Crystallography. All rights reserved.

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Year:  2012        PMID: 22505428      PMCID: PMC3325828          DOI: 10.1107/S1744309112009384

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  29 in total

Review 1.  bZIP transcription factors in Arabidopsis.

Authors:  Marc Jakoby; Bernd Weisshaar; Wolfgang Dröge-Laser; Jesus Vicente-Carbajosa; Jens Tiedemann; Thomas Kroj; François Parcy
Journal:  Trends Plant Sci       Date:  2002-03       Impact factor: 18.313

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Authors:  Y Fujii; T Shimizu; T Toda; M Yanagida; T Hakoshima
Journal:  Nat Struct Biol       Date:  2000-10

3.  ESPript: analysis of multiple sequence alignments in PostScript.

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Journal:  Bioinformatics       Date:  1999-04       Impact factor: 6.937

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Authors:  P K Busk; M Pagès
Journal:  Plant Mol Biol       Date:  1998-06       Impact factor: 4.076

5.  Solvent content of protein crystals.

Authors:  B W Matthews
Journal:  J Mol Biol       Date:  1968-04-28       Impact factor: 5.469

Review 6.  ABA-mediated transcriptional regulation in response to osmotic stress in plants.

Authors:  Yasunari Fujita; Miki Fujita; Kazuo Shinozaki; Kazuko Yamaguchi-Shinozaki
Journal:  J Plant Res       Date:  2011-03-18       Impact factor: 2.629

7.  The structure of a CREB bZIP.somatostatin CRE complex reveals the basis for selective dimerization and divalent cation-enhanced DNA binding.

Authors:  M A Schumacher; R H Goodman; R G Brennan
Journal:  J Biol Chem       Date:  2000-11-10       Impact factor: 5.157

8.  Structural basis for DNA recognition by the basic region leucine zipper transcription factor CCAAT/enhancer-binding protein alpha.

Authors:  Maria Miller; Jon D Shuman; Thomas Sebastian; Zbigniew Dauter; Peter F Johnson
Journal:  J Biol Chem       Date:  2003-02-10       Impact factor: 5.157

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Journal:  Plant Mol Biol       Date:  1994-12       Impact factor: 4.076

10.  Crystal structure of the heterodimeric bZIP transcription factor c-Fos-c-Jun bound to DNA.

Authors:  J N Glover; S C Harrison
Journal:  Nature       Date:  1995-01-19       Impact factor: 49.962

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  2 in total

1.  Genome-wide identification, characterisation, and evolution of ABF/AREB subfamily in nine Rosaceae species and expression analysis in mei (Prunus mume).

Authors:  Xue Yong; Tangchun Zheng; Xiaokang Zhuo; Sagheer Ahmad; Lulu Li; Ping Li; Jiayao Yu; Jia Wang; Tangren Cheng; Qixiang Zhang
Journal:  PeerJ       Date:  2021-02-04       Impact factor: 2.984

2.  Specificity determinants for the abscisic acid response element.

Authors:  Aditya Kumar Sarkar; Ansuman Lahiri
Journal:  FEBS Open Bio       Date:  2013-01-22       Impact factor: 2.693

  2 in total

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