Literature DB >> 22505419

Towards the crystal structure elucidation of eukaryotic UDP-galactopyranose mutase.

Karin E van Straaten1, Francoise H Routier, David A R Sanders.   

Abstract

UDP-galactopyranose mutase (UGM) catalyzes the interconversion of UDP-galactopyranose and UDP-galactofuranose. Eukaryotic UGMs from Aspergillus fumigatus and Leishmania major have been purified to homogeneity by means of Ni(2+)-affinity chromatography and crystallized. Eukaryotic UGM structure elucidation was not straightforward owing to high pseudo-symmetry, twinning and very low anomalous signal. Phasing to 2.8 Å resolution using SAD was successful for L. major UGM. However, the maps could only be improved by iterative density modification and manual model building. High pseudo-symmetry and twinning prevented correct space-group assignment and the completion of structure refinement. The structure of A. fumigatus UGM to 2.52 Å resolution was determined by molecular replacement using the incomplete 2.8 Å resolution L. major UGM model.
© 2012 International Union of Crystallography. All rights reserved.

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Year:  2012        PMID: 22505419      PMCID: PMC3325819          DOI: 10.1107/S1744309112006914

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  31 in total

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2.  Identification and partial characterization of two eukaryotic UDP-galactopyranose mutases.

Authors:  Hans Bakker; Barbara Kleczka; Rita Gerardy-Schahn; Françoise H Routier
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Review 3.  Galactofuranose metabolism: a potential target for antimicrobial chemotherapy.

Authors:  L L Pedersen; S J Turco
Journal:  Cell Mol Life Sci       Date:  2003-02       Impact factor: 9.261

4.  Characterization of recombinant UDP-galactopyranose mutase from Aspergillus fumigatus.

Authors:  Michelle Oppenheimer; Myles B Poulin; Todd L Lowary; Richard F Helm; Pablo Sobrado
Journal:  Arch Biochem Biophys       Date:  2010-07-06       Impact factor: 4.013

5.  Isolation and characterization of functional Leishmania major virulence factor UDP-galactopyranose mutase.

Authors:  Michelle Oppenheimer; Ana L Valenciano; Pablo Sobrado
Journal:  Biochem Biophys Res Commun       Date:  2011-03-16       Impact factor: 3.575

6.  X-ray crystallography reveals a reduced substrate complex of UDP-galactopyranose mutase poised for covalent catalysis by flavin.

Authors:  Todd D Gruber; William M Westler; Laura L Kiessling; Katrina T Forest
Journal:  Biochemistry       Date:  2009-10-06       Impact factor: 3.162

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  5 in total

Review 1.  Structure, mechanism, and dynamics of UDP-galactopyranose mutase.

Authors:  John J Tanner; Leonardo Boechi; J Andrew McCammon; Pablo Sobrado
Journal:  Arch Biochem Biophys       Date:  2013-10-03       Impact factor: 4.013

2.  Structural insight into the unique substrate binding mechanism and flavin redox state of UDP-galactopyranose mutase from Aspergillus fumigatus.

Authors:  Karin E van Straaten; Françoise H Routier; David A R Sanders
Journal:  J Biol Chem       Date:  2012-02-10       Impact factor: 5.157

3.  Aspergillus nidulans cell wall composition and function change in response to hosting several Aspergillus fumigatus UDP-galactopyranose mutase activity mutants.

Authors:  Md Kausar Alam; Karin E van Straaten; David A R Sanders; Susan G W Kaminskyj
Journal:  PLoS One       Date:  2014-01-15       Impact factor: 3.240

4.  QM/MM molecular dynamics study of the galactopyranose → galactofuranose reaction catalysed by Trypanosoma cruzi UDP-galactopyranose mutase.

Authors:  Gustavo Pierdominici-Sottile; Rodrigo Cossio Pérez; Johan F Galindo; Juliana Palma
Journal:  PLoS One       Date:  2014-10-09       Impact factor: 3.240

Review 5.  N5 Is the New C4a: Biochemical Functionalization of Reduced Flavins at the N5 Position.

Authors:  Brett A Beaupre; Graham R Moran
Journal:  Front Mol Biosci       Date:  2020-10-30
  5 in total

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