Literature DB >> 22504226

Structural and thermodynamic characterization of the interaction between two periplasmic Treponema pallidum lipoproteins that are components of a TPR-protein-associated TRAP transporter (TPAT).

Chad A Brautigam1, Ranjit K Deka, Peter Schuck, Diana R Tomchick, Michael V Norgard.   

Abstract

Tripartite ATP-independent periplasmic transporters (TRAP-Ts) are bacterial transport systems that have been implicated in the import of small molecules into the cytoplasm. A newly discovered subfamily of TRAP-Ts [tetratricopeptide repeat-protein associated TRAP transporters (TPATs)] has four components. Three are common to both TRAP-Ts and TPATs: the P component, a ligand-binding protein, and a transmembrane symporter apparatus comprising the M and Q components (M and Q are sometimes fused to form a single polypeptide). TPATs are distinguished from TRAP-Ts by the presence of a unique protein called the "T component". In Treponema pallidum, this protein (TatT) is a water-soluble trimer whose protomers are each perforated by a pore. Its respective P component (TatP(T)) interacts with the TatT in vitro and in vivo. In this work, we further characterized this interaction. Co-crystal structures of two complexes between the two proteins confirm that up to three monomers of TatP(T) can bind to the TatT trimer. A putative ligand-binding cleft of TatP(T) aligns with the pore of TatT, strongly suggesting ligand transfer between T and P(T). We used a combination of site-directed mutagenesis and analytical ultracentrifugation to derive thermodynamic parameters for the interactions. These observations confirm that the observed crystallographic interface is recapitulated in solution. These results prompt a hypothesis of the molecular mechanism(s) of hydrophobic ligand transport by the TPATs.
Copyright © 2012 Elsevier Ltd. All rights reserved.

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Year:  2012        PMID: 22504226      PMCID: PMC3367087          DOI: 10.1016/j.jmb.2012.04.001

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  64 in total

1.  Direct sedimentation analysis of interference optical data in analytical ultracentrifugation.

Authors:  P Schuck; B Demeler
Journal:  Biophys J       Date:  1999-04       Impact factor: 4.033

Review 2.  Global prevalence and incidence estimates of selected curable STDs.

Authors:  A C Gerbase; J T Rowley; D H Heymann; S F Berkley; P Piot
Journal:  Sex Transm Infect       Date:  1998-06       Impact factor: 3.519

3.  Protonmotive force, ExbB and ligand-bound FepA drive conformational changes in TonB.

Authors:  R A Larsen; M G Thomas; K Postle
Journal:  Mol Microbiol       Date:  1999-03       Impact factor: 3.501

4.  Secondary-structure matching (SSM), a new tool for fast protein structure alignment in three dimensions.

Authors:  E Krissinel; K Henrick
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2004-11-26

Review 5.  Transport proteins in bacteria: common themes in their design.

Authors:  H Nikaido; M H Saier
Journal:  Science       Date:  1992-11-06       Impact factor: 47.728

6.  Crystallography & NMR system: A new software suite for macromolecular structure determination.

Authors:  A T Brünger; P D Adams; G M Clore; W L DeLano; P Gros; R W Grosse-Kunstleve; J S Jiang; J Kuszewski; M Nilges; N S Pannu; R J Read; L M Rice; T Simonson; G L Warren
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1998-09-01

7.  Characterization of outer membranes isolated from Treponema pallidum, the syphilis spirochete.

Authors:  J D Radolf; E J Robinson; K W Bourell; D R Akins; S F Porcella; L M Weigel; J D Jones; M V Norgard
Journal:  Infect Immun       Date:  1995-11       Impact factor: 3.441

8.  Fatty acids of Treponema pallidum and Borrelia burgdorferi lipoproteins.

Authors:  J T Belisle; M E Brandt; J D Radolf; M V Norgard
Journal:  J Bacteriol       Date:  1994-04       Impact factor: 3.490

Review 9.  Treponema pallidum and the quest for outer membrane proteins.

Authors:  J D Radolf
Journal:  Mol Microbiol       Date:  1995-06       Impact factor: 3.501

10.  Complete genome sequence of Treponema pallidum, the syphilis spirochete.

Authors:  C M Fraser; S J Norris; G M Weinstock; O White; G G Sutton; R Dodson; M Gwinn; E K Hickey; R Clayton; K A Ketchum; E Sodergren; J M Hardham; M P McLeod; S Salzberg; J Peterson; H Khalak; D Richardson; J K Howell; M Chidambaram; T Utterback; L McDonald; P Artiach; C Bowman; M D Cotton; C Fujii; S Garland; B Hatch; K Horst; K Roberts; M Sandusky; J Weidman; H O Smith; J C Venter
Journal:  Science       Date:  1998-07-17       Impact factor: 47.728

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  17 in total

1.  Structural, bioinformatic, and in vivo analyses of two Treponema pallidum lipoproteins reveal a unique TRAP transporter.

Authors:  Ranjit K Deka; Chad A Brautigam; Martin Goldberg; Peter Schuck; Diana R Tomchick; Michael V Norgard
Journal:  J Mol Biol       Date:  2012-01-27       Impact factor: 5.469

2.  Insights into the potential function and membrane organization of the TP0435 (Tp17) lipoprotein from Treponema pallidum derived from structural and biophysical analyses.

Authors:  Chad A Brautigam; Ranjit K Deka; Wei Z Liu; Michael V Norgard
Journal:  Protein Sci       Date:  2014-10-25       Impact factor: 6.725

Review 3.  The Treponema pallidum Outer Membrane.

Authors:  Justin D Radolf; Sanjiv Kumar
Journal:  Curr Top Microbiol Immunol       Date:  2018       Impact factor: 4.291

4.  Purification, crystallization and preliminary X-ray analysis of TP0435 (Tp17) from the syphilis spirochete Treponema pallidum.

Authors:  Chad A Brautigam; Ranjit K Deka; Michael V Norgard
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2013-03-28

5.  Interaction between the PH and START domains of ceramide transfer protein competes with phosphatidylinositol 4-phosphate binding by the PH domain.

Authors:  Jennifer Prashek; Samuel Bouyain; Mingui Fu; Yong Li; Dusan Berkes; Xiaolan Yao
Journal:  J Biol Chem       Date:  2017-06-26       Impact factor: 5.157

Review 6.  Treponema pallidum, the syphilis spirochete: making a living as a stealth pathogen.

Authors:  Justin D Radolf; Ranjit K Deka; Arvind Anand; David Šmajs; Michael V Norgard; X Frank Yang
Journal:  Nat Rev Microbiol       Date:  2016-10-10       Impact factor: 60.633

7.  The TP0796 lipoprotein of Treponema pallidum is a bimetal-dependent FAD pyrophosphatase with a potential role in flavin homeostasis.

Authors:  Ranjit K Deka; Chad A Brautigam; Wei Z Liu; Diana R Tomchick; Michael V Norgard
Journal:  J Biol Chem       Date:  2013-02-27       Impact factor: 5.157

8.  Biophysical and bioinformatic analyses implicate the Treponema pallidum Tp34 lipoprotein (Tp0971) in transition metal homeostasis.

Authors:  Chad A Brautigam; Ranjit K Deka; Zhiming Ouyang; Mischa Machius; Gregory Knutsen; Diana R Tomchick; Michael V Norgard
Journal:  J Bacteriol       Date:  2012-10-05       Impact factor: 3.490

Review 9.  Syphilis.

Authors:  Rosanna W Peeling; David Mabey; Mary L Kamb; Xiang-Sheng Chen; Justin D Radolf; Adele S Benzaken
Journal:  Nat Rev Dis Primers       Date:  2017-10-12       Impact factor: 52.329

10.  Evidence for an ABC-type riboflavin transporter system in pathogenic spirochetes.

Authors:  Ranjit K Deka; Chad A Brautigam; Brent A Biddy; Wei Z Liu; Michael V Norgard
Journal:  MBio       Date:  2013-02-12       Impact factor: 7.867

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