Literature DB >> 22499938

Integrating genomes.

D R Zerbino1, B Paten, D Haussler.   

Abstract

As genomic sequencing projects attempt ever more ambitious integration of genetic, molecular, and phenotypic information, a specialization of genomics has emerged, embodied in the subdiscipline of computational genomics. Models inherited from population genetics, phylogenetics, and human disease genetics merge with those from graph theory, statistics, signal processing, and computer science to provide a rich quantitative foundation for genomics that can only be realized with the aid of a computer. Unleashed on a rapidly increasing sample of the planet's 10(30) organisms, these analyses will have an impact on diverse fields of science while providing an extraordinary new window into the story of life.

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Year:  2012        PMID: 22499938     DOI: 10.1126/science.1216830

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  9 in total

1.  Comprehensively identifying and characterizing the missing gene sequences in human reference genome with integrated analytic approaches.

Authors:  Geng Chen; Charles Wang; Leming Shi; Weida Tong; Xiongfei Qu; Jiwei Chen; Jianmin Yang; Caiping Shi; Long Chen; Peiying Zhou; Bingxin Lu; Tieliu Shi
Journal:  Hum Genet       Date:  2013-04-10       Impact factor: 4.132

Review 2.  Genomics in cardiovascular disease.

Authors:  Robert Roberts; A J Marian; Sonny Dandona; Alexandre F R Stewart
Journal:  J Am Coll Cardiol       Date:  2013-03-21       Impact factor: 24.094

Review 3.  What are we learning from the cancer genome?

Authors:  Eric A Collisson; Raymond J Cho; Joe W Gray
Journal:  Nat Rev Clin Oncol       Date:  2012-09-11       Impact factor: 66.675

4.  Prize-based contests can provide solutions to computational biology problems.

Authors:  Karim R Lakhani; Kevin J Boudreau; Po-Ru Loh; Lars Backstrom; Carliss Baldwin; Eric Lonstein; Mike Lydon; Alan MacCormack; Ramy A Arnaout; Eva C Guinan
Journal:  Nat Biotechnol       Date:  2013-02       Impact factor: 54.908

5.  Computational medicine: translating models to clinical care.

Authors:  Raimond L Winslow; Natalia Trayanova; Donald Geman; Michael I Miller
Journal:  Sci Transl Med       Date:  2012-10-31       Impact factor: 17.956

6.  Big data analytics in immunology: a knowledge-based approach.

Authors:  Guang Lan Zhang; Jing Sun; Lou Chitkushev; Vladimir Brusic
Journal:  Biomed Res Int       Date:  2014-06-22       Impact factor: 3.411

7.  Genome alignment with graph data structures: a comparison.

Authors:  Birte Kehr; Kathrin Trappe; Manuel Holtgrewe; Knut Reinert
Journal:  BMC Bioinformatics       Date:  2014-04-09       Impact factor: 3.169

8.  Big (sequencing) future of non-coding RNA research for the understanding of cocaine.

Authors:  Da-Yu Wu
Journal:  Front Genet       Date:  2012-09-03       Impact factor: 4.599

Review 9.  Stem cell systems informatics for advanced clinical biodiagnostics: tracing molecular signatures from bench to bedside.

Authors:  Randolph S Faustino; D Kent Arrell; Clifford D L Folmes; Andre Terzic; Carmen Perez-Terzic
Journal:  Croat Med J       Date:  2013-08       Impact factor: 1.351

  9 in total

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