Literature DB >> 22499937

Cell polarity: quantitative modeling as a tool in cell biology.

Alex Mogilner1, Jun Allard, Roy Wollman.   

Abstract

Among a number of innovative approaches that have modernized cell biology, modeling has a prominent yet unusual place. One popular view is that we progress linearly, from conceptual to ever more detailed models. We review recent discoveries of cell polarity mechanisms, in which modeling played an important role, to demonstrate that the experiment-theory feedback loop requires diverse models characterized by varying levels of biological detail and mathematical complexity. We argue that a quantitative model is a tool that has to fit an experimental study, and the model's value should be judged not by how complex and detailed it is, but by what could be learned from it.

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Year:  2012        PMID: 22499937     DOI: 10.1126/science.1216380

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  40 in total

Review 1.  How B cells capture, process and present antigens: a crucial role for cell polarity.

Authors:  Maria-Isabel Yuseff; Paolo Pierobon; Anne Reversat; Ana-Maria Lennon-Duménil
Journal:  Nat Rev Immunol       Date:  2013-07       Impact factor: 53.106

Review 2.  Imaging methodologies for systems biology.

Authors:  Sarah E Smith; Brian D Slaughter; Jay R Unruh
Journal:  Cell Adh Migr       Date:  2014-11-01       Impact factor: 3.405

3.  Spatiotemporal dynamics of a reaction-diffusion model of pollen tube tip growth.

Authors:  Chenwei Tian; Qingyan Shi; Xinping Cui; Jingzhe Guo; Zhenbiao Yang; Junping Shi
Journal:  J Math Biol       Date:  2019-07-06       Impact factor: 2.259

4.  Dynamic Migration Modes of Collective Cells.

Authors:  Shao-Zhen Lin; Sang Ye; Guang-Kui Xu; Bo Li; Xi-Qiao Feng
Journal:  Biophys J       Date:  2018-09-20       Impact factor: 4.033

5.  Spherical Caps in Cell Polarization.

Authors:  Rocky Diegmiller; Hadrien Montanelli; Cyrill B Muratov; Stanislav Y Shvartsman
Journal:  Biophys J       Date:  2018-06-20       Impact factor: 4.033

6.  Optically triggering spatiotemporally confined GPCR activity in a cell and programming neurite initiation and extension.

Authors:  W K Ajith Karunarathne; Lopamudra Giri; Vani Kalyanaraman; N Gautam
Journal:  Proc Natl Acad Sci U S A       Date:  2013-03-11       Impact factor: 11.205

Review 7.  There is more than one way to model an elephant. Experiment-driven modeling of the actin cytoskeleton.

Authors:  Jonathon A Ditlev; Bruce J Mayer; Leslie M Loew
Journal:  Biophys J       Date:  2013-02-05       Impact factor: 4.033

8.  Feedback mechanisms in a mechanical model of cell polarization.

Authors:  Xinxin Wang; Anders E Carlsson
Journal:  Phys Biol       Date:  2014-10-14       Impact factor: 2.583

9.  An Experimental Model for Simultaneous Study of Migration of Cell Fragments, Single Cells, and Cell Sheets.

Authors:  Yao-Hui Sun; Yuxin Sun; Kan Zhu; Bruce W Draper; Qunli Zeng; Alex Mogilner; Min Zhao
Journal:  Methods Mol Biol       Date:  2016

Review 10.  Regulation of actin dynamics and protein trafficking during spermatogenesis--insights into a complex process.

Authors:  Wenhui Su; Dolores D Mruk; C Yan Cheng
Journal:  Crit Rev Biochem Mol Biol       Date:  2013-01-23       Impact factor: 8.250

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