Literature DB >> 22498631

Proteomics: The interaction map.

Monya Baker.   

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Year:  2012        PMID： 22498631     DOI： 10.1038/484271a

Source DB:  PubMed          Journal:  Nature        ISSN： 0028-0836            Impact factor:   49.962


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  11 in total

1.  Array MAPPIT: high-throughput interactome analysis in mammalian cells.

Authors:  Sam Lievens; Nele Vanderroost; José Van der Heyden; Viola Gesellchen; Marc Vidal; Jan Tavernier
Journal:  J Proteome Res       Date:  2009-02       Impact factor: 4.466

2.  A comprehensive analysis of protein-protein interactions in Saccharomyces cerevisiae.

Authors:  P Uetz; L Giot; G Cagney; T A Mansfield; R S Judson; J R Knight; D Lockshon; V Narayan; M Srinivasan; P Pochart; A Qureshi-Emili; Y Li; B Godwin; D Conover; T Kalbfleisch; G Vijayadamodar; M Yang; M Johnston; S Fields; J M Rothberg
Journal:  Nature       Date:  2000-02-10       Impact factor: 49.962

3.  High-throughput mapping of a dynamic signaling network in mammalian cells.

Authors:  Miriam Barrios-Rodiles; Kevin R Brown; Barish Ozdamar; Rohit Bose; Zhong Liu; Robert S Donovan; Fukiko Shinjo; Yongmei Liu; Joanna Dembowy; Ian W Taylor; Valbona Luga; Natasa Przulj; Mark Robinson; Harukazu Suzuki; Yoshihide Hayashizaki; Igor Jurisica; Jeffrey L Wrana
Journal:  Science       Date:  2005-03-11       Impact factor: 47.728

4.  Global landscape of HIV-human protein complexes.

Authors:  Stefanie Jäger; Peter Cimermancic; Natali Gulbahce; Jeffrey R Johnson; Kathryn E McGovern; Starlynn C Clarke; Michael Shales; Gaelle Mercenne; Lars Pache; Kathy Li; Hilda Hernandez; Gwendolyn M Jang; Shoshannah L Roth; Eyal Akiva; John Marlett; Melanie Stephens; Iván D'Orso; Jason Fernandes; Marie Fahey; Cathal Mahon; Anthony J O'Donoghue; Aleksandar Todorovic; John H Morris; David A Maltby; Tom Alber; Gerard Cagney; Frederic D Bushman; John A Young; Sumit K Chanda; Wesley I Sundquist; Tanja Kortemme; Ryan D Hernandez; Charles S Craik; Alma Burlingame; Andrej Sali; Alan D Frankel; Nevan J Krogan
Journal:  Nature       Date:  2011-12-21       Impact factor: 49.962

5.  Three-dimensional reconstruction of protein networks provides insight into human genetic disease.

Authors:  Xiujuan Wang; Xiaomu Wei; Bram Thijssen; Jishnu Das; Steven M Lipkin; Haiyuan Yu
Journal:  Nat Biotechnol       Date:  2012-01-15       Impact factor: 54.908

6.  A novel genetic system to detect protein-protein interactions.

Authors:  S Fields; O Song
Journal:  Nature       Date:  1989-07-20       Impact factor: 49.962

7.  A comprehensive two-hybrid analysis to explore the yeast protein interactome.

Authors:  T Ito; T Chiba; R Ozawa; M Yoshida; M Hattori; Y Sakaki
Journal:  Proc Natl Acad Sci U S A       Date:  2001-03-13       Impact factor: 11.205

8.  A human MAP kinase interactome.

Authors:  Sourav Bandyopadhyay; Chih-yuan Chiang; Jyoti Srivastava; Merril Gersten; Suhaila White; Russell Bell; Cornelia Kurschner; Christopher H Martin; Mike Smoot; Sudhir Sahasrabudhe; Diane L Barber; Sumit K Chanda; Trey Ideker
Journal:  Nat Methods       Date:  2010-10       Impact factor: 28.547

9.  An in vivo map of the yeast protein interactome.

Authors:  Kirill Tarassov; Vincent Messier; Christian R Landry; Stevo Radinovic; Mercedes M Serna Molina; Igor Shames; Yelena Malitskaya; Jackie Vogel; Howard Bussey; Stephen W Michnick
Journal:  Science       Date:  2008-05-08       Impact factor: 47.728

10.  An experimentally derived confidence score for binary protein-protein interactions.

Authors:  Pascal Braun; Murat Tasan; Matija Dreze; Miriam Barrios-Rodiles; Irma Lemmens; Haiyuan Yu; Julie M Sahalie; Ryan R Murray; Luba Roncari; Anne-Sophie de Smet; Kavitha Venkatesan; Jean-François Rual; Jean Vandenhaute; Michael E Cusick; Tony Pawson; David E Hill; Jan Tavernier; Jeffrey L Wrana; Frederick P Roth; Marc Vidal
Journal:  Nat Methods       Date:  2008-12-07       Impact factor: 28.547
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  10 in total

Review 1.  Next-generation proteomics: towards an integrative view of proteome dynamics.

Authors:  A F Maarten Altelaar; Javier Munoz; Albert J R Heck
Journal:  Nat Rev Genet       Date:  2012-12-04       Impact factor: 53.242

2.  Measuring protein interactions using Förster resonance energy transfer and fluorescence lifetime imaging microscopy.

Authors:  Richard N Day
Journal:  Methods       Date:  2013-06-24       Impact factor: 3.608

3.  Extended Linkers Improve the Detection of Protein-protein Interactions (PPIs) by Dihydrofolate Reductase Protein-fragment Complementation Assay (DHFR PCA) in Living Cells.

Authors:  Andrée-Ève Chrétien; Isabelle Gagnon-Arsenault; Alexandre K Dubé; Xavier Barbeau; Philippe C Després; Claudine Lamothe; Anne-Marie Dion-Côté; Patrick Lagüe; Christian R Landry
Journal:  Mol Cell Proteomics       Date:  2017-12-04       Impact factor: 5.911

4.  Comparative transcriptomic analysis reveals mechanisms of divergence in osmotic regulation of the turbot Scophthalmus maximus.

Authors:  Wenxiao Cui; Aijun Ma; Zhihui Huang; Xinan Wang; Zhifeng Liu; Dandan Xia; Shuangshuang Yang; Tingting Zhao
Journal:  Fish Physiol Biochem       Date:  2020-05-07       Impact factor: 2.794

Review 5.  Machine learning: its challenges and opportunities in plant system biology.

Authors:  Mohsen Hesami; Milad Alizadeh; Andrew Maxwell Phineas Jones; Davoud Torkamaneh
Journal:  Appl Microbiol Biotechnol       Date:  2022-05-16       Impact factor: 4.813

Review 6.  Innovative in Silico Approaches for Characterization of Genes and Proteins.

Authors:  Gh Rasool Bhat; Itty Sethi; Bilal Rah; Rakesh Kumar; Dil Afroze
Journal:  Front Genet       Date:  2022-05-18       Impact factor: 4.772

7.  Predicting the binding patterns of hub proteins: a study using yeast protein interaction networks.

Authors:  Carson M Andorf; Vasant Honavar; Taner Z Sen
Journal:  PLoS One       Date:  2013-02-19       Impact factor: 3.240

8.  Decrypting protein surfaces by combining evolution, geometry, and molecular docking.

Authors:  Chloé Dequeker; Elodie Laine; Alessandra Carbone
Journal:  Proteins       Date:  2019-06-26

Review 9.  Bringing single-molecule spectroscopy to macromolecular protein complexes.

Authors:  Chirlmin Joo; Mohamed Fareh; V Narry Kim
Journal:  Trends Biochem Sci       Date:  2012-11-28       Impact factor: 13.807

10.  GeneSense: a new approach for human gene annotation integrated with protein-protein interaction networks.

Authors:  Zhongzhong Chen; Tianhong Zhang; Jun Lin; Zidan Yan; Yongren Wang; Weiqiang Zheng; Kevin C Weng
Journal:  Sci Rep       Date:  2014-03-26       Impact factor: 4.379
  10 in total

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