Literature DB >> 22497446

A novel USP9Y polymorphism allowing a rapid and unambiguous classification of Bos taurus Y chromosomes into haplogroups.

S Bonfiglio1, A De Gaetano, K Tesfaye, V Grugni, O Semino, L Ferretti.   

Abstract

A new sequence-tagged site (STS) was identified within intron 26 of the bovine USP9Y gene, showing an 81-base pair insertion (g.76439_76440ins81 in sequence with GenBank accession FJ195366) able to distinguish Y2 and Y3 Bos Y haplogroups from Y1. Moreover, four Y3-specific sequence variants allow a distinction from haplogroup Y2. The typing of a Bison bison Y chromosome indicates that the ancestral allele for the USP9Y 81-bp insertion is the short Y1 version. The results from typing the new STS in 1230 cattle Y chromosomes are fully consistent with their classification through standard methods. Thanks to the newly identified STS, it is now possible to assign cattle Y chromosomes to the currently known haplogroups using a single marker.
© 2012 The Authors, Animal Genetics © 2012 Stichting International Foundation for Animal Genetics.

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Year:  2012        PMID: 22497446     DOI: 10.1111/j.1365-2052.2012.02328.x

Source DB:  PubMed          Journal:  Anim Genet        ISSN: 0268-9146            Impact factor:   3.169


  5 in total

1.  Y chromosome diversity and paternal origin of Chinese cattle.

Authors:  Ran Li; Wen-Mei Xie; Zhen-Hua Chang; Shao-Qiang Wang; Rui-Hua Dang; Xian-Yong Lan; Hong Chen; Chu-Zhao Lei
Journal:  Mol Biol Rep       Date:  2013-09-25       Impact factor: 2.316

2.  Species composition and environmental adaptation of indigenous Chinese cattle.

Authors:  Yahui Gao; Mathieu Gautier; Xiangdong Ding; Hao Zhang; Yachun Wang; Xi Wang; Md Omar Faruque; Junya Li; Shaohui Ye; Xiao Gou; Jianlin Han; Johannes A Lenstra; Yi Zhang
Journal:  Sci Rep       Date:  2017-11-23       Impact factor: 4.379

3.  Y-chromosome genetic diversity of Bos indicus cattle in close proximity to the centre of domestication.

Authors:  Indrajit Ganguly; C Jeevan; Sanjeev Singh; S P Dixit; Monika Sodhi; Ashish Ranjan; Suchit Kumar; Anurodh Sharma
Journal:  Sci Rep       Date:  2020-06-19       Impact factor: 4.379

4.  Genetic variation of Nigerian cattle inferred from maternal and paternal genetic markers.

Authors:  David H Mauki; Adeniyi C Adeola; Said I Ng'ang'a; Abdulfatai Tijjani; Ibikunle Mark Akanbi; Oscar J Sanke; Abdussamad M Abdussamad; Sunday C Olaogun; Jebi Ibrahim; Philip M Dawuda; Godwin F Mangbon; Paul S Gwakisa; Ting-Ting Yin; Min-Sheng Peng; Ya-Ping Zhang
Journal:  PeerJ       Date:  2021-03-05       Impact factor: 2.984

5.  Genome sequencing of the extinct Eurasian wild aurochs, Bos primigenius, illuminates the phylogeography and evolution of cattle.

Authors:  Stephen D E Park; David A Magee; Paul A McGettigan; Matthew D Teasdale; Ceiridwen J Edwards; Amanda J Lohan; Alison Murphy; Martin Braud; Mark T Donoghue; Yuan Liu; Andrew T Chamberlain; Kévin Rue-Albrecht; Steven Schroeder; Charles Spillane; Shuaishuai Tai; Daniel G Bradley; Tad S Sonstegard; Brendan J Loftus; David E MacHugh
Journal:  Genome Biol       Date:  2015-10-26       Impact factor: 13.583

  5 in total

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