Literature DB >> 22497351

Molecular tools and analytical approaches for the characterization of farm animal genetic diversity.

J A Lenstra1, L F Groeneveld, H Eding, J Kantanen, J L Williams, P Taberlet, E L Nicolazzi, J Sölkner, H Simianer, E Ciani, J F Garcia, M W Bruford, P Ajmone-Marsan, S Weigend.   

Abstract

Genetic studies of livestock populations focus on questions of domestication, within- and among-breed diversity, breed history and adaptive variation. In this review, we describe the use of different molecular markers and methods for data analysis used to address these questions. There is a clear trend towards the use of single nucleotide polymorphisms and whole-genome sequence information, the application of Bayesian or Approximate Bayesian analysis and the use of adaptive next to neutral diversity to support decisions on conservation.
© 2012 The Authors, Animal Genetics © 2012 Stichting International Foundation for Animal Genetics.

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Year:  2012        PMID: 22497351     DOI: 10.1111/j.1365-2052.2011.02309.x

Source DB:  PubMed          Journal:  Anim Genet        ISSN: 0268-9146            Impact factor:   3.169


  30 in total

1.  Genomic diversity and population structure of three autochthonous Greek sheep breeds assessed with genome-wide DNA arrays.

Authors:  S Michailidou; G Tsangaris; G C Fthenakis; A Tzora; I Skoufos; S C Karkabounas; G Banos; A Argiriou; G Arsenos
Journal:  Mol Genet Genomics       Date:  2018-01-25       Impact factor: 3.291

2.  Association of SNP variants of MHC Class II DRB gene with thermo-physiological traits in tropical goats.

Authors:  Abdulmojeed Yakubu; Adebowale E Salako; Marcos De Donato; Sunday O Peters; Michael I Takeet; Mathew Wheto; Moses Okpeku; Ikhide G Imumorin
Journal:  Trop Anim Health Prod       Date:  2016-12-01       Impact factor: 1.559

3.  Inbreeding and pedigree analysis of the European red dairy cattle.

Authors:  Sofia Nyman; Anna M Johansson; Valentina Palucci; Anna A Schönherz; Bernt Guldbrandtsen; Dirk Hinrichs; Dirk-Jan de Koning
Journal:  Genet Sel Evol       Date:  2022-10-23       Impact factor: 5.100

4.  Merino and Merino-derived sheep breeds: a genome-wide intercontinental study.

Authors:  Elena Ciani; Emiliano Lasagna; Mariasilvia D'Andrea; Ingrid Alloggio; Fabio Marroni; Simone Ceccobelli; Juan V Delgado Bermejo; Francesca M Sarti; James Kijas; Johannes A Lenstra; Fabio Pilla
Journal:  Genet Sel Evol       Date:  2015-08-14       Impact factor: 4.297

5.  Composite Selection Signals for Complex Traits Exemplified Through Bovine Stature Using Multibreed Cohorts of European and African Bos taurus.

Authors:  Imtiaz A S Randhawa; Mehar S Khatkar; Peter C Thomson; Herman W Raadsma
Journal:  G3 (Bethesda)       Date:  2015-04-30       Impact factor: 3.154

6.  Using genome-wide measures of coancestry to maintain diversity and fitness in endangered and domestic pig populations.

Authors:  Mirte Bosse; Hendrik-Jan Megens; Ole Madsen; Richard P M A Crooijmans; Oliver A Ryder; Frédéric Austerlitz; Martien A M Groenen; M Angeles R de Cara
Journal:  Genome Res       Date:  2015-06-10       Impact factor: 9.043

7.  Genome-wide estimates of coancestry and inbreeding in a closed herd of ancient Iberian pigs.

Authors:  María Saura; Almudena Fernández; M Carmen Rodríguez; Miguel A Toro; Carmen Barragán; Ana I Fernández; Beatriz Villanueva
Journal:  PLoS One       Date:  2013-10-31       Impact factor: 3.240

8.  Genomic selection for recovery of original genetic background from hybrids of endangered and common breeds.

Authors:  Carmen Amador; Ben J Hayes; Hans D Daetwyler
Journal:  Evol Appl       Date:  2013-10-14       Impact factor: 5.183

9.  Identification of genetic variation on the horse y chromosome and the tracing of male founder lineages in modern breeds.

Authors:  Barbara Wallner; Claus Vogl; Priyank Shukla; Joerg P Burgstaller; Thomas Druml; Gottfried Brem
Journal:  PLoS One       Date:  2013-04-03       Impact factor: 3.240

Review 10.  Expanding possibilities for intervention against small ruminant lentiviruses through genetic marker-assisted selective breeding.

Authors:  Stephen N White; Donald P Knowles
Journal:  Viruses       Date:  2013-06-14       Impact factor: 5.048

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