Literature DB >> 22493195

Genome sequence of the polyhydroxybutyrate producer Pseudomonas extremaustralis, a highly stress-resistant Antarctic bacterium.

Paula M Tribelli1, Laura J Raiger Iustman, Mariela V Catone, Carla Di Martino, Santiago Revale, Beatriz S Méndez, Nancy I López.   

Abstract

Pseudomonas extremaustralis 14-3b presents genes involved in the synthesis of different polyhydroxyalkanoates, in tolerance and degradation of pollutants, and in microaerobic metabolism. Several genomic islands were detected. Genetic machinery could contribute to the adaptability to stressful conditions. This is the first genome sequence reported from a Pseudomonas isolated from cold environments.

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Year:  2012        PMID: 22493195      PMCID: PMC3347083          DOI: 10.1128/JB.00172-12

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  9 in total

1.  Oxygen-sensitive global regulator, Anr, is involved in the biosynthesis of poly(3-hydroxybutyrate) in Pseudomonas extremaustralis.

Authors:  Paula M Tribelli; Beatriz S Méndez; Nancy I López
Journal:  J Mol Microbiol Biotechnol       Date:  2010-10-29

2.  Impaired polyhydroxybutyrate biosynthesis from glucose in Pseudomonas sp. 14-3 is due to a defective beta-ketothiolase gene.

Authors:  Nicolás D Ayub; M Julia Pettinari; Beatriz S Méndez; Nancy I López
Journal:  FEMS Microbiol Lett       Date:  2006-11       Impact factor: 2.742

3.  A polyhydroxybutyrate-producing Pseudomonas sp. isolated from Antarctic environments with high stress resistance.

Authors:  Nicolás D Ayub; M Julia Pettinari; Jimena A Ruiz; Nancy I López
Journal:  Curr Microbiol       Date:  2004-09       Impact factor: 2.188

4.  Polyhydroxyalkanoates are essential for maintenance of redox state in the Antarctic bacterium Pseudomonas sp. 14-3 during low temperature adaptation.

Authors:  Nicolás D Ayub; Paula M Tribelli; Nancy I López
Journal:  Extremophiles       Date:  2008-10-18       Impact factor: 2.395

5.  Positive FNR-like control of anaerobic arginine degradation and nitrate respiration in Pseudomonas aeruginosa.

Authors:  M Galimand; M Gamper; A Zimmermann; D Haas
Journal:  J Bacteriol       Date:  1991-03       Impact factor: 3.490

6.  Pseudomonas extremaustralis sp. nov., a Poly(3-hydroxybutyrate) producer isolated from an antarctic environment.

Authors:  Nancy I López; M Julia Pettinari; Erko Stackebrandt; Paula M Tribelli; Markus Põtter; Alexander Steinbüchel; Beatriz S Méndez
Journal:  Curr Microbiol       Date:  2009-08-18       Impact factor: 2.188

7.  The polyhydroxyalkanoate genes of a stress resistant Antarctic Pseudomonas are situated within a genomic island.

Authors:  Nicolás D Ayub; M Julia Pettinari; Beatriz S Méndez; Nancy I López
Journal:  Plasmid       Date:  2007-07-16       Impact factor: 3.466

8.  IslandViewer: an integrated interface for computational identification and visualization of genomic islands.

Authors:  Morgan G I Langille; Fiona S L Brinkman
Journal:  Bioinformatics       Date:  2009-01-16       Impact factor: 6.937

9.  The RAST Server: rapid annotations using subsystems technology.

Authors:  Ramy K Aziz; Daniela Bartels; Aaron A Best; Matthew DeJongh; Terrence Disz; Robert A Edwards; Kevin Formsma; Svetlana Gerdes; Elizabeth M Glass; Michael Kubal; Folker Meyer; Gary J Olsen; Robert Olson; Andrei L Osterman; Ross A Overbeek; Leslie K McNeil; Daniel Paarmann; Tobias Paczian; Bruce Parrello; Gordon D Pusch; Claudia Reich; Rick Stevens; Olga Vassieva; Veronika Vonstein; Andreas Wilke; Olga Zagnitko
Journal:  BMC Genomics       Date:  2008-02-08       Impact factor: 3.969

  9 in total
  17 in total

1.  Ubiquitin activates patatin-like phospholipases from multiple bacterial species.

Authors:  David M Anderson; Hiromi Sato; Aaron T Dirck; Jimmy B Feix; Dara W Frank
Journal:  J Bacteriol       Date:  2014-11-17       Impact factor: 3.490

2.  Discovery of bacterial polyhydroxyalkanoate synthase (PhaC)-encoding genes from seasonal Baltic Sea ice and cold estuarine waters.

Authors:  Katariina Pärnänen; Antti Karkman; Marko Virta; Eeva Eronen-Rasimus; Hermanni Kaartokallio
Journal:  Extremophiles       Date:  2014-10-04       Impact factor: 2.395

3.  Genome sequence analysis of Pseudomonas extremaustralis provides new insights into environmental adaptability and extreme conditions resistance.

Authors:  Laura J Raiger Iustman; Paula M Tribelli; José G Ibarra; Mariela V Catone; Esmeralda C Solar Venero; Nancy I López
Journal:  Extremophiles       Date:  2014-10-15       Impact factor: 2.395

4.  Effect of copper on diesel degradation in Pseudomonas extremaustralis.

Authors:  María Antonela Colonnella; Leonardo Lizarraga; Leticia Rossi; Rocío Díaz Peña; Diego Egoburo; Nancy I López; Laura J Raiger Iustman
Journal:  Extremophiles       Date:  2018-10-17       Impact factor: 2.395

5.  Response to lethal UVA radiation in the Antarctic bacterium Pseudomonas extremaustralis: polyhydroxybutyrate and cold adaptation as protective factors.

Authors:  Paula M Tribelli; Magdalena Pezzoni; María Gabriela Brito; Nahuel V Montesinos; Cristina S Costa; Nancy I López
Journal:  Extremophiles       Date:  2019-12-11       Impact factor: 2.395

6.  Psychrotrophic Pseudomonas mandelii CBS-1 produces high levels of poly-β-hydroxybutyrate.

Authors:  Rongpeng Li; Yuji Jiang; Xinfeng Wang; Jingjing Yang; Yuan Gao; Xiaoli Zi; Xia Zhang; Haofeng Gao; Nan Hu
Journal:  Springerplus       Date:  2013-07-23

7.  Genome sequence reveals that Pseudomonas fluorescens F113 possesses a large and diverse array of systems for rhizosphere function and host interaction.

Authors:  Miguel Redondo-Nieto; Matthieu Barret; John Morrissey; Kieran Germaine; Francisco Martínez-Granero; Emma Barahona; Ana Navazo; María Sánchez-Contreras; Jennifer A Moynihan; Candela Muriel; David Dowling; Fergal O'Gara; Marta Martín; Rafael Rivilla
Journal:  BMC Genomics       Date:  2013-01-25       Impact factor: 3.969

8.  Genome mining for methanobactins.

Authors:  Grace E Kenney; Amy C Rosenzweig
Journal:  BMC Biol       Date:  2013-02-26       Impact factor: 7.431

9.  Draft Genome Sequence of Pseudomonas veronii Strain 1YdBTEX2.

Authors:  Daiana de Lima-Morales; Diego Chaves-Moreno; Michael Jarek; Ramiro Vilchez-Vargas; Ruy Jauregui; Dietmar H Pieper
Journal:  Genome Announc       Date:  2013-05-16

10.  The global anaerobic regulator Anr, is involved in cell attachment and aggregation influencing the first stages of biofilm development in Pseudomonas extremaustralis.

Authors:  Paula M Tribelli; Anthony G Hay; Nancy I López
Journal:  PLoS One       Date:  2013-10-16       Impact factor: 3.240

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