Literature DB >> 22493173

Amphibacillus indicireducens sp. nov., an alkaliphile that reduces an indigo dye.

Kikue Hirota1, Kenichi Aino2,1, Yoshinobu Nodasaka3, Naoki Morita2,1, Isao Yumoto2,1.   

Abstract

Two indigo-reducing alkaliphilic strains, designated strain C40(T) and strain N214, were isolated from a fermented Polygonum Indigo (Polygonum tinctorium Lour.) liquor sample aged for 10 months and obtained from Date City, Hokkaido, Japan. 16S rRNA gene sequence phylogeny suggested that strains C40(T) and N214 were members of the genus Amphibacillus with the closest relative being Amphibacillus xylanus JCM 7361(T) (97.5 % 16S rRNA gene sequence similarity with strain C40(T)), which is the only strain having a 16S rRNA gene sequence similarity higher than 97 % with strain C40(T). Cells of strain C40(T) were Gram-stain-positive, facultatively anaerobic, straight rods that were motile by means of peritrichous flagella. The strains grew between 17 and 39 °C (optimum, 35 °C) and in the pH range of 9.0-12.0. No isoprenoid quinone was detected and the DNA G+C content was 37.5-37.7 mol%. The whole-cell fatty acid profile mainly consisted of iso-C(15 : 0) and anteiso-C(15 : 0). DNA-DNA hybridization of strain C40(T) with Amphibacillus xylanus JCM 7361(T) revealed a DNA-DNA relatedness value of 10±3 %. Owing to the differences in phenotypic characteristics and phylogenetic analyses based on 16S rRNA gene sequences, as well as DNA-DNA relatedness data from reported species of the genus Amphibacillus, the isolates merit classification as a novel species in the genus Amphibacillus, for which the name Amphibacillus indicireducens sp. nov. is proposed. The type strain is C40(T) ( = JCM 17250(T) = NCIMB 14686(T)). An additional strain of the species is N214. An emended description of the genus Amphibacillus is provided.

Entities:  

Mesh:

Substances:

Year:  2012        PMID: 22493173     DOI: 10.1099/ijs.0.037622-0

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  7 in total

1.  Characterization of the microbiota in long- and short-term natural indigo fermentation.

Authors:  Zhihao Tu; Helena de Fátima Silva Lopes; Kensuke Igarashi; Isao Yumoto
Journal:  J Ind Microbiol Biotechnol       Date:  2019-08-20       Impact factor: 3.346

2.  Development of media to accelerate the isolation of indigo-reducing bacteria, which are difficult to isolate using conventional media.

Authors:  Masatoshi Nishita; Kikue Hirota; Hidetoshi Matsuyama; Isao Yumoto
Journal:  World J Microbiol Biotechnol       Date:  2017-06-05       Impact factor: 3.312

3.  Analysis of microbiota involved in the aged natural fermentation of indigo.

Authors:  Takahiro Okamoto; Kenichi Aino; Takashi Narihiro; Hidetoshi Matsuyama; Isao Yumoto
Journal:  World J Microbiol Biotechnol       Date:  2017-03-11       Impact factor: 3.312

4.  Draft Genome Sequence of Amphibacillus jilinensis Y1(T), a Facultatively Anaerobic, Alkaliphilic and Halotolerant Bacterium.

Authors:  Hong Cheng; Ming-Xu Fang; Xia-Wei Jiang; Min Wu; Xu-Fen Zhu; Gang Zheng; Zhi-Jian Yang
Journal:  Stand Genomic Sci       Date:  2013-07-30

5.  Intracellular free flavin and its associated enzymes participate in oxygen and iron metabolism in Amphibacillus xylanus lacking a respiratory chain.

Authors:  Shinya Kimata; Daichi Mochizuki; Junichi Satoh; Ken Kitano; Yu Kanesaki; Kouji Takeda; Akira Abe; Shinji Kawasaki; Youichi Niimura
Journal:  FEBS Open Bio       Date:  2018-05-09       Impact factor: 2.693

6.  Fermentation Blues: Analyzing the Microbiota of Traditional Indigo Vat Dyeing in Hunan, China.

Authors:  Shan Li; Yuru Shi; Hui Huang; Yan Tong; Shaohua Wu; Yuhua Wang
Journal:  Microbiol Spectr       Date:  2022-06-16

Review 7.  Microbial Communities Associated With Indigo Fermentation That Thrive in Anaerobic Alkaline Environments.

Authors:  Keiichi Aino; Kikue Hirota; Takahiro Okamoto; Zhihao Tu; Hidetoshi Matsuyama; Isao Yumoto
Journal:  Front Microbiol       Date:  2018-09-18       Impact factor: 5.640

  7 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.