Literature DB >> 22482951

Stochastic models of cell protrusion arising from spatiotemporal signaling and adhesion dynamics.

Erik S Welf1, Jason M Haugh.   

Abstract

During cell migration, local protrusion events are regulated by biochemical and physical processes that are in turn coordinated with the dynamic properties of cell-substratum adhesion structures. In this chapter, we present a modeling approach for integrating the apparent stochasticity and spatial dependence of signal transduction pathways that promote protrusion in tandem with adhesion dynamics. We describe our modeling framework, as well as its abstraction, parameterization, and validation against experimental data. Analytical techniques for identifying and evaluating the effects of model bistability on simulation simulation results are shown, and implications of this analysis for understanding cell protrusion behavior are offered.
Copyright © 2012 Elsevier Inc. All rights reserved.

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Year:  2012        PMID: 22482951      PMCID: PMC4117837          DOI: 10.1016/B978-0-12-388403-9.00009-6

Source DB:  PubMed          Journal:  Methods Cell Biol        ISSN: 0091-679X            Impact factor:   1.441


  36 in total

1.  Integrin-mediated adhesion regulates cell polarity and membrane protrusion through the Rho family of GTPases.

Authors:  E A Cox; S K Sastry; A Huttenlocher
Journal:  Mol Biol Cell       Date:  2001-02       Impact factor: 4.138

2.  In vivo dynamics of Rac-membrane interactions.

Authors:  Konstadinos Moissoglu; Boris M Slepchenko; Nahum Meller; Alan F Horwitz; Martin A Schwartz
Journal:  Mol Biol Cell       Date:  2006-04-05       Impact factor: 4.138

3.  Regulation of focal adhesion and cell migration by ANKRD28-DOCK180 interaction.

Authors:  Etsuko Kiyokawa; Michiyuki Matsuda
Journal:  Cell Adh Migr       Date:  2009-07-27       Impact factor: 3.405

Review 4.  Paxillin comes of age.

Authors:  Nicholas O Deakin; Christopher E Turner
Journal:  J Cell Sci       Date:  2008-08-01       Impact factor: 5.285

5.  Measuring mechanical tension across vinculin reveals regulation of focal adhesion dynamics.

Authors:  Carsten Grashoff; Brenton D Hoffman; Michael D Brenner; Ruobo Zhou; Maddy Parsons; Michael T Yang; Mark A McLean; Stephen G Sligar; Christopher S Chen; Taekjip Ha; Martin A Schwartz
Journal:  Nature       Date:  2010-07-08       Impact factor: 49.962

6.  An adhesion-dependent switch between mechanisms that determine motile cell shape.

Authors:  Erin L Barnhart; Kun-Chun Lee; Kinneret Keren; Alex Mogilner; Julie A Theriot
Journal:  PLoS Biol       Date:  2011-05-03       Impact factor: 8.029

7.  Myosin IIA/IIB restrict adhesive and protrusive signaling to generate front-back polarity in migrating cells.

Authors:  Miguel Vicente-Manzanares; Karen Newell-Litwa; Alexia I Bachir; Leanna A Whitmore; Alan Rick Horwitz
Journal:  J Cell Biol       Date:  2011-04-11       Impact factor: 10.539

8.  Regulation of protrusion, adhesion dynamics, and polarity by myosins IIA and IIB in migrating cells.

Authors:  Miguel Vicente-Manzanares; Jessica Zareno; Leanna Whitmore; Colin K Choi; Alan F Horwitz
Journal:  J Cell Biol       Date:  2007-02-20       Impact factor: 10.539

9.  Paxillin phosphorylation at Ser273 localizes a GIT1-PIX-PAK complex and regulates adhesion and protrusion dynamics.

Authors:  Anjana Nayal; Donna J Webb; Claire M Brown; Erik M Schaefer; Miguel Vicente-Manzanares; Alan Rick Horwitz
Journal:  J Cell Biol       Date:  2006-05-22       Impact factor: 10.539

10.  Quantification of local morphodynamics and local GTPase activity by edge evolution tracking.

Authors:  Yuki Tsukada; Kazuhiro Aoki; Takeshi Nakamura; Yuichi Sakumura; Michiyuki Matsuda; Shin Ishii
Journal:  PLoS Comput Biol       Date:  2008-11-14       Impact factor: 4.475

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  5 in total

1.  Axon growth regulation by a bistable molecular switch.

Authors:  Pranesh Padmanabhan; Geoffrey J Goodhill
Journal:  Proc Biol Sci       Date:  2018-04-25       Impact factor: 5.349

2.  Bidirectional coupling between integrin-mediated signaling and actomyosin mechanics explains matrix-dependent intermittency of leading-edge motility.

Authors:  Erik S Welf; Heath E Johnson; Jason M Haugh
Journal:  Mol Biol Cell       Date:  2013-10-23       Impact factor: 4.138

3.  Epithelial to Mesenchymal transition, eIF2α phosphorylation and Hsp70 expression enable greater tolerance in A549 cells to TiO2 over ZnO nanoparticles.

Authors:  Ansie Martin; Angshuman Sarkar
Journal:  Sci Rep       Date:  2019-01-24       Impact factor: 4.379

4.  In silico Prediction on the PI3K/AKT/mTOR Pathway of the Antiproliferative Effect of O. joconostle in Breast Cancer Models.

Authors:  Alejandra Ortiz-González; Pedro Pablo González-Pérez; Maura Cárdenas-García; María Guadalupe Hernández-Linares
Journal:  Cancer Inform       Date:  2022-03-25

5.  MEDYAN: Mechanochemical Simulations of Contraction and Polarity Alignment in Actomyosin Networks.

Authors:  Konstantin Popov; James Komianos; Garegin A Papoian
Journal:  PLoS Comput Biol       Date:  2016-04-27       Impact factor: 4.475

  5 in total

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