Literature DB >> 22482586

An enhanced entangled polymer model for dissipative particle dynamics.

Timothy W Sirk1, Yelena R Slizoberg, John K Brennan, Martin Lisal, Jan W Andzelm.   

Abstract

We develop an alternative polymer model to capture entanglements within the dissipative particle dynamics (DPD) framework by using simplified bond-bond repulsive interactions to prevent bond crossings. We show that structural and thermodynamic properties can be improved by applying a segmental repulsive potential (SRP) that is a function of the distance between the midpoints of the segments, rather than the minimum distance between segments. The alternative approach, termed the modified segmental repulsive potential (mSRP), is shown to produce chain structures and thermodynamic properties that are similar to the softly repulsive, flexible chains of standard DPD. Parameters for the mSRP are determined from topological, structural, and thermodynamic considerations. The effectiveness of the mSRP in capturing entanglements is demonstrated by calculating the diffusion and mechanical properties of an entangled polymer melt.

Entities:  

Year:  2012        PMID: 22482586     DOI: 10.1063/1.3698476

Source DB:  PubMed          Journal:  J Chem Phys        ISSN: 0021-9606            Impact factor:   3.488


  8 in total

1.  Effectiveness of coarse graining degree and speedup on the dynamic properties of homopolymer.

Authors:  Lijuan Liao; Changyu Meng; Chenguang Huang
Journal:  J Mol Model       Date:  2021-01-28       Impact factor: 1.810

2.  Behavior and mechanics of dense microgel suspensions.

Authors:  Svetoslav V Nikolov; Alberto Fernandez-Nieves; Alexander Alexeev
Journal:  Proc Natl Acad Sci U S A       Date:  2020-10-19       Impact factor: 11.205

3.  Organization of associating or crosslinked actin filaments in confinement.

Authors:  Maral Adeli Koudehi; David M Rutkowski; Dimitrios Vavylonis
Journal:  Cytoskeleton (Hoboken)       Date:  2019-10-31

4.  Platelet heterogeneity enhances blood clot volumetric contraction: An example of asynchrono-mechanical amplification.

Authors:  Yueyi Sun; David R Myers; Svetoslav V Nikolov; Oluwamayokun Oshinowo; John Baek; Samuel M Bowie; Tamara P Lambert; Eric Woods; Yumiko Sakurai; Wilbur A Lam; Alexander Alexeev
Journal:  Biomaterials       Date:  2021-04-23       Impact factor: 15.304

Review 5.  DPD Modelling of the Self- and Co-Assembly of Polymers and Polyelectrolytes in Aqueous Media: Impact on Polymer Science.

Authors:  Karel Procházka; Zuzana Limpouchová; Miroslav Štěpánek; Karel Šindelka; Martin Lísal
Journal:  Polymers (Basel)       Date:  2022-01-20       Impact factor: 4.329

6.  Discrete mechanical model of lamellipodial actin network implements molecular clutch mechanism and generates arcs and microspikes.

Authors:  David M Rutkowski; Dimitrios Vavylonis
Journal:  PLoS Comput Biol       Date:  2021-10-18       Impact factor: 4.475

7.  Mesoscale Modeling of Agglomeration of Molecular Bottlebrushes: Focus on Conformations and Clustering Criteria.

Authors:  Sidong Tu; Chandan K Choudhury; Michaela Giltner; Igor Luzinov; Olga Kuksenok
Journal:  Polymers (Basel)       Date:  2022-06-09       Impact factor: 4.967

8.  Resolving the missing link between single platelet force and clot contractile force.

Authors:  Yueyi Sun; Oluwamayokun Oshinowo; David R Myers; Wilbur A Lam; Alexander Alexeev
Journal:  iScience       Date:  2021-12-27
  8 in total

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