Literature DB >> 22481745

Magnetic resonance connectome automated pipeline: an overview.

William R Gray1, John A Bogovic, Joshua T Vogelstein, Bennett A Landman, Jerry L Prince, R J Vogelstein.   

Abstract

This article presents a novel, tightly integrated pipeline for estimating a connectome. The pipeline utilizes magnetic resonance (MR) imaging (MRI) data to produce a high-level estimate of the structural connectivity in the human brain. The MR connectome automated pipeline (MRCAP) is efficient, and its modular construction allows researchers to modify algorithms to meet their specific requirements. The pipeline has been validated, and more than 200 connectomes have been processed and analyzed to date.

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Mesh：

Year:  2012        PMID： 22481745     DOI： 10.1109/MPUL.2011.2181023

Source DB:  PubMed          Journal:  IEEE Pulse        ISSN： 2154-2287            Impact factor:   0.924


  7 in total

1.  Connectome Smoothing via Low-Rank Approximations.

Authors:  Runze Tange; Michael Ketcha; Alexandra Badea; Evan D Calabrese; Daniel S Margulies; Joshua T Vogelstein; Carey E Priebe; Daniel L Sussman
Journal:  IEEE Trans Med Imaging       Date:  2018-12-10       Impact factor: 10.048

2.  Matchability of heterogeneous networks pairs.

Authors:  Vince Lyzinski; Daniel L Sussman
Journal:  Inf inference       Date:  2020-01-06

3.  Next Generation of the Java Image Science Toolkit (JIST): Visualization and Validation.

Authors:  Bo Li; Frederick Bryan; Bennett A Landman
Journal:  Insight J       Date:  2012-08-15

4.  Graph Matching: Relax at Your Own Risk.

Authors:  Vince Lyzinski; Donniell E Fishkind; Marcelo Fiori; Joshua T Vogelstein; Carey E Priebe; Guillermo Sapiro
Journal:  IEEE Trans Pattern Anal Mach Intell       Date:  2016-01       Impact factor: 6.226

5.  The connectome mapper: an open-source processing pipeline to map connectomes with MRI.

Authors:  Alessandro Daducci; Stephan Gerhard; Alessandra Griffa; Alia Lemkaddem; Leila Cammoun; Xavier Gigandet; Reto Meuli; Patric Hagmann; Jean-Philippe Thiran
Journal:  PLoS One       Date:  2012-12-18       Impact factor: 3.240

6.  The Connectome Visualization Utility: software for visualization of human brain networks.

Authors:  Roan A LaPlante; Linda Douw; Wei Tang; Steven M Stufflebeam
Journal:  PLoS One       Date:  2014-12-01       Impact factor: 3.240

7.  The topology of large Open Connectome networks for the human brain.

Authors:  Michael T Gastner; Géza Ódor
Journal:  Sci Rep       Date:  2016-06-07       Impact factor: 4.379
  7 in total

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