Literature DB >> 22474346

Structure of p73 DNA-binding domain tetramer modulates p73 transactivation.

Abdul S Ethayathulla1, Pui-Wah Tse, Paola Monti, Sonha Nguyen, Alberto Inga, Gilberto Fronza, Hector Viadiu.   

Abstract

The transcription factor p73 triggers developmental pathways and overlaps stress-induced p53 transcriptional pathways. How p53-family response elements determine and regulate transcriptional specificity remains an unsolved problem. In this work, we have determined the first crystal structures of p73 DNA-binding domain tetramer bound to response elements with spacers of different length. The structure and function of the adaptable tetramer are determined by the distance between two half-sites. The structures with zero and one base-pair spacers show compact p73 DNA-binding domain tetramers with large tetramerization interfaces; a two base-pair spacer results in DNA unwinding and a smaller tetramerization interface, whereas a four base-pair spacer hinders tetramerization. Functionally, p73 is more sensitive to spacer length than p53, with one base-pair spacer reducing 90% of transactivation activity and longer spacers reducing transactivation to basal levels. Our results establish the quaternary structure of the p73 DNA-binding domain required as a scaffold to promote transactivation.

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Year:  2012        PMID: 22474346      PMCID: PMC3341074          DOI: 10.1073/pnas.1115463109

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  35 in total

1.  Crystal structure of the mouse p53 core DNA-binding domain at 2.7 A resolution.

Authors:  K Zhao; X Chai; K Johnston; A Clements; R Marmorstein
Journal:  J Biol Chem       Date:  2001-01-04       Impact factor: 5.157

2.  p63 and p73 are required for p53-dependent apoptosis in response to DNA damage.

Authors:  Elsa R Flores; Kenneth Y Tsai; Denise Crowley; Shomit Sengupta; Annie Yang; Frank McKeon; Tyler Jacks
Journal:  Nature       Date:  2002-04-04       Impact factor: 49.962

3.  Crystal structure of a multidomain human p53 tetramer bound to the natural CDKN1A (p21) p53-response element.

Authors:  Soheila Emamzadah; Laurence Tropia; Thanos D Halazonetis
Journal:  Mol Cancer Res       Date:  2011-09-20       Impact factor: 5.852

4.  Diversity in DNA recognition by p53 revealed by crystal structures with Hoogsteen base pairs.

Authors:  Malka Kitayner; Haim Rozenberg; Remo Rohs; Oded Suad; Dov Rabinovich; Barry Honig; Zippora Shakked
Journal:  Nat Struct Mol Biol       Date:  2010-04-04       Impact factor: 15.369

5.  An anti-apoptotic role for the p53 family member, p73, during developmental neuron death.

Authors:  C D Pozniak; S Radinovic; A Yang; F McKeon; D R Kaplan; F D Miller
Journal:  Science       Date:  2000-07-14       Impact factor: 47.728

6.  Differential regulation of the p73 cistrome by mammalian target of rapamycin reveals transcriptional programs of mesenchymal differentiation and tumorigenesis.

Authors:  Jennifer M Rosenbluth; Deborah J Mays; Aixiang Jiang; Yu Shyr; Jennifer A Pietenpol
Journal:  Proc Natl Acad Sci U S A       Date:  2011-01-18       Impact factor: 11.205

7.  An induced fit mechanism regulates p53 DNA binding kinetics to confer sequence specificity.

Authors:  Tom J Petty; Soheila Emamzadah; Lorenzo Costantino; Irina Petkova; Elena S Stavridi; Jeffery G Saven; Eric Vauthey; Thanos D Halazonetis
Journal:  EMBO J       Date:  2011-04-26       Impact factor: 11.598

Review 8.  p73: Friend or foe in tumorigenesis.

Authors:  Gerry Melino; Vincenzo De Laurenzi; Karen H Vousden
Journal:  Nat Rev Cancer       Date:  2002-08       Impact factor: 60.716

9.  Crosstalk between c-Jun and TAp73alpha/beta contributes to the apoptosis-survival balance.

Authors:  Max Koeppel; Simon J van Heeringen; Daniela Kramer; Leonie Smeenk; Eva Janssen-Megens; Marianne Hartmann; Hendrik G Stunnenberg; Marion Lohrum
Journal:  Nucleic Acids Res       Date:  2011-03-31       Impact factor: 16.971

10.  p53 transactivation and the impact of mutations, cofactors and small molecules using a simplified yeast-based screening system.

Authors:  Virginia Andreotti; Yari Ciribilli; Paola Monti; Alessandra Bisio; Mattia Lion; Jennifer Jordan; Gilberto Fronza; Paola Menichini; Michael A Resnick; Alberto Inga
Journal:  PLoS One       Date:  2011-06-02       Impact factor: 3.240

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  29 in total

1.  Robust IR-based detection of stable and fractionally populated G-C+ and A-T Hoogsteen base pairs in duplex DNA.

Authors:  Allison L Stelling; Yu Xu; Huiqing Zhou; Seung H Choi; Mary C Clay; Dawn K Merriman; Hashim M Al-Hashimi
Journal:  FEBS Lett       Date:  2017-06-19       Impact factor: 4.124

Review 2.  New insights into Hoogsteen base pairs in DNA duplexes from a structure-based survey.

Authors:  Huiqing Zhou; Bradley J Hintze; Isaac J Kimsey; Bharathwaj Sathyamoorthy; Shan Yang; Jane S Richardson; Hashim M Al-Hashimi
Journal:  Nucleic Acids Res       Date:  2015-03-26       Impact factor: 16.971

3.  Crystal structures of the DNA-binding domain tetramer of the p53 tumor suppressor family member p73 bound to different full-site response elements.

Authors:  Abdul S Ethayathulla; H Thien Nguyen; Hector Viadiu
Journal:  J Biol Chem       Date:  2012-12-14       Impact factor: 5.157

4.  YAP regulates the expression of Hoxa1 and Hoxc13 in mouse and human oral and skin epithelial tissues.

Authors:  Ming Liu; Shuangyun Zhao; Qingjie Lin; Xiu-Ping Wang
Journal:  Mol Cell Biol       Date:  2015-02-17       Impact factor: 4.272

5.  Characterizing Watson-Crick versus Hoogsteen Base Pairing in a DNA-Protein Complex Using Nuclear Magnetic Resonance and Site-Specifically 13C- and 15N-Labeled DNA.

Authors:  Huiqing Zhou; Bharathwaj Sathyamoorthy; Allison Stelling; Yu Xu; Yi Xue; Ying Zhang Pigli; David A Case; Phoebe A Rice; Hashim M Al-Hashimi
Journal:  Biochemistry       Date:  2019-04-05       Impact factor: 3.162

Review 6.  Increasing occurrences and functional roles for high energy purine-pyrimidine base-pairs in nucleic acids.

Authors:  Isaac Kimsey; Hashim M Al-Hashimi
Journal:  Curr Opin Struct Biol       Date:  2014-01-09       Impact factor: 6.809

7.  Structure of p53 binding to the BAX response element reveals DNA unwinding and compression to accommodate base-pair insertion.

Authors:  Yongheng Chen; Xiaojun Zhang; Ana Carolina Dantas Machado; Yuan Ding; Zhuchu Chen; Peter Z Qin; Remo Rohs; Lin Chen
Journal:  Nucleic Acids Res       Date:  2013-07-08       Impact factor: 16.971

8.  Molecular dynamics of the full-length p53 monomer.

Authors:  Giovanni Chillemi; Pavel Davidovich; Marco D'Abramo; Tazhir Mametnabiev; Alexander Vasilievich Garabadzhiu; Alessandro Desideri; Gerry Melino
Journal:  Cell Cycle       Date:  2013-09-05       Impact factor: 4.534

9.  Pirh2, an E3 ligase, regulates the AIP4-p73 regulatory pathway by modulating AIP4 expression and ubiquitination.

Authors:  Rami Abou Zeinab; H Helena Wu; Yasser Abuetabh; Sarah Leng; Consolato Sergi; David D Eisenstat; Roger P Leng
Journal:  Carcinogenesis       Date:  2021-04-30       Impact factor: 4.944

10.  Transactivation specificity is conserved among p53 family proteins and depends on a response element sequence code.

Authors:  Yari Ciribilli; Paola Monti; Alessandra Bisio; H Thien Nguyen; Abdul S Ethayathulla; Ana Ramos; Giorgia Foggetti; Paola Menichini; Daniel Menendez; Michael A Resnick; Hector Viadiu; Gilberto Fronza; Alberto Inga
Journal:  Nucleic Acids Res       Date:  2013-07-26       Impact factor: 16.971

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