| Literature DB >> 22461838 |
Xiao-Yan Li1, Shu-Li Liu, Na Cha, Yu-Jie Zhao, Shao-Cheng Wang, Wei-Nan Li, En-Hua Wang, Guang-Ping Wu.
Abstract
OBJECTIVE: To evaluate diagnostic utility of Dishevelled-3 (DVL-3) mRNA and δ-catenin mRNA expression in pleural effusions of patients with lung cancer.Entities:
Mesh:
Substances:
Year: 2012 PMID: 22461838 PMCID: PMC3296179 DOI: 10.1155/2012/904946
Source DB: PubMed Journal: Clin Dev Immunol ISSN: 1740-2522
Sequences and features of the primers used for RT-PCR.
| Names | Sequence of sense and antisense of primers | Melting temperature | Length |
|---|---|---|---|
| DVL-3 | 5′- AACCAGGGGGTTATGATAGCTC-3′ | 57°C | 387 bp |
|
| 5′-TACTCCGCAAGACGACTGACC-3′ | 57°C | 284 bp |
|
| 5′-TGGCACCCAGCACAATGAA −3′ | 55°C | 186 bp |
bp: base pairs.
Figure 1RT-PCR amplified products of DVL-3, -catenin, and -actin in pleural effusions of patients with lung cancer and benign diseases. The 387, 284, and 186 bp DNA fragments were expected to be amplified from DVL-3, -catenin, and -actin cDNAs, respectively. Lane M represented DNA marker (50–500 bp). Lanes 1, 2, 3, 6 and 7 represented pleural effusion of patients with lung cancer, respectively. Lanes 4 and 5 represented pleural effusion of patients with benign diseases, respectively.
Results for DVL-3 mRNA, -catenin mRNA expression by RT-PCR and for cytological assessment in pleural effusions of patients with benign or malignant lung lesions.
| Group |
| DVL-3 mRNA |
| Cytology | |||
|---|---|---|---|---|---|---|---|
| + | − | + | − | + | − | ||
| Pneumonia | 26 | 2 | 24 | 4 | 22 | 0 | 26 |
| Tuberculosis | 25 | 1 | 24 | 1 | 24 | 0 | 25 |
| Adenocarcinoma | 75 | 67∗§ | 8 | 69∗§ | 6 | 44 | 31 |
*P < 0.01 as compared to pneumonia and tuberculosis. § P < 0.01 as compared to cytology. (i) The DVL-3 mRNAs were positively correlated with -catenin mRNA (r = 0.743). Date are number of specimens.
Results obtained by cytological assessment as compared with those obtained by RT-PCR for DVL-3 mRNA and -catenin mRNA or by histology in pleural effusions specimens from patients with benign or malignant lung lesions.
| Cytology | Total | DVL-3 mRNA |
| Histology | |||
|---|---|---|---|---|---|---|---|
|
| + | − | + | − | + | − | |
| Pneumonia | 40 | 2 | 38 | 4 | 36 | 0 | 40 |
| Tuberculosis | 11 | 1 | 10 | 1 | 10 | 0 | 11 |
| RMC | 13 | 12 | 1 | 12 | 1 | 13 | 0 |
| Suspected to be malignant | 18 | 15 | 3 | 18 | 0 | 18 | 0 |
| Adenocarcinoma cells | 44 | 40 | 4 | 39 | 5 | 44 | 0 |
|
| |||||||
| Total | 126 | 70 | 56 | 74 | 52 | 75 | 51 |
Date are number of specimens. RMC: reactive mesothelial cells.
Accuracy of RT-PCR for detection of DVL-3 mRNA, δ-catenin mRNA and combination of them compared with cytology for the diagnosis of lung cancer.
| Variables | Single | Combination of | Cytology | |
|---|---|---|---|---|
| DVL-3 |
| DVL-3 plus | ||
| Sensitivity (%) | 89.3 | 92.0 | 100.0* | 58.7 |
| Specificity (%) | 94.1 | 90.2 | 90.2 | 100.0 |
| Accuracy (%) | 91.3 | 91.3 | 96.0* | 75.4 |
| PPV (%) | 95.7 | 93.2 | 93.8 | 100.0 |
| NPV (%) | 85.7 | 88.5 | 100.0* | 62.2 |
PPV: positive predictive value; NPV: negative predictive value; *P < 0.01 comparing RT-PCR of combination group with cytology.