Literature DB >> 22461431

CHRNA3/5, IREB2, and ADCY2 are associated with severe chronic obstructive pulmonary disease in Poland.

Megan Hardin1, Jan Zielinski, Emily S Wan, Craig P Hersh, Peter J Castaldi, Eric Schwinder, Iwona Hawrylkiewicz, Pawel Sliwinski, Michael H Cho, Edwin K Silverman.   

Abstract

We examined the association between single-nucleotide polymorphisms (SNPs) previously associated with chronic obstructive pulmonary disease (COPD) and/or lung function with COPD and COPD-related phenotypes in a novel cohort of patients with severe to very severe COPD. We examined 315 cases of COPD and 330 Caucasian control smokers from Poland. We included three SNPs previously associated with COPD: rs7671167 (FAM13A), rs13180 (IREB2), and rs8034191 (CHRNA 3/5), and four SNPs associated with lung function in a genome-wide association study of general population samples: rs2070600 (AGER), rs11134242 (ADCY2), rs4316710 (THSD4), and rs17096090 (INTS12). We tested for associations with severe COPD and COPD-related phenotypes, including lung function, smoking behavior, and body mass index. Subjects with COPD were older (average age 62 versus 58 years, P < 0.01), with more pack-years of smoking (45 versus 33 pack-years, P < 0.01). CHRNA3/5 (odds ratio [OR], 1.89; 95% confidence interval [CI], 1.5-2.4; P = 7.4 × 10(-7)), IREB2 (OR, 0.69; 95% CI, 0.5-0.9; P = 3.4 × 10(-3)), and ADCY2 (OR, 1.35; 95% CI, 1.1-1.7; P = 0.01) demonstrated significant associations with COPD. FAM13A (OR, 0.8; 95% CI, 0.7-1.0; P = 0.11) approached statistical significance. FAM13A and ADCY2 also demonstrated a significant association with lung function. Thus, in severe to very severe COPD, we demonstrate a replication of association between two SNPs previously associated with COPD (CHRNA3/5 and IREB2), as well as an association with COPD of one locus initially associated with lung function (ADCY2).

Entities:  

Mesh:

Substances:

Year:  2012        PMID: 22461431      PMCID: PMC3423462          DOI: 10.1165/rcmb.2012-0011OC

Source DB:  PubMed          Journal:  Am J Respir Cell Mol Biol        ISSN: 1044-1549            Impact factor:   6.914


  37 in total

1.  Role of genetic variants in the CHRNA5-CHRNA3-CHRNB4 cluster in nicotine dependence risk: importance of gene-environment interplay.

Authors:  L Greenbaum; A Rigbi; O Teltsh; B Lerer
Journal:  Mol Psychiatry       Date:  2009-09       Impact factor: 15.992

Review 2.  Genetics of COPD and emphysema.

Authors:  Emily S Wan; Edwin K Silverman
Journal:  Chest       Date:  2009-09       Impact factor: 9.410

3.  Mediating effects of smoking and chronic obstructive pulmonary disease on the relation between the CHRNA5-A3 genetic locus and lung cancer risk.

Authors:  Jian Wang; Margaret R Spitz; Christopher I Amos; Anna V Wilkinson; Xifeng Wu; Sanjay Shete
Journal:  Cancer       Date:  2010-07-15       Impact factor: 6.860

4.  Risk for nicotine dependence and lung cancer is conferred by mRNA expression levels and amino acid change in CHRNA5.

Authors:  Jen C Wang; Carlos Cruchaga; Nancy L Saccone; Sarah Bertelsen; Pengyuan Liu; John P Budde; Weimin Duan; Louis Fox; Richard A Grucza; Jason Kern; Kevin Mayo; Oliver Reyes; John Rice; Scott F Saccone; Noah Spiegel; Joseph H Steinbach; Jerry A Stitzel; Marshall W Anderson; Ming You; Victoria L Stevens; Laura J Bierut; Alison M Goate
Journal:  Hum Mol Genet       Date:  2009-05-14       Impact factor: 6.150

5.  Variants in FAM13A are associated with chronic obstructive pulmonary disease.

Authors:  Michael H Cho; Nadia Boutaoui; Barbara J Klanderman; Jody S Sylvia; John P Ziniti; Craig P Hersh; Dawn L DeMeo; Gary M Hunninghake; Augusto A Litonjua; David Sparrow; Christoph Lange; Sungho Won; James R Murphy; Terri H Beaty; Elizabeth A Regan; Barry J Make; John E Hokanson; James D Crapo; Xiangyang Kong; Wayne H Anderson; Ruth Tal-Singer; David A Lomas; Per Bakke; Amund Gulsvik; Sreekumar G Pillai; Edwin K Silverman
Journal:  Nat Genet       Date:  2010-02-21       Impact factor: 38.330

6.  Racial differences in the association between SNPs on 15q25.1, smoking behavior, and risk of non-small cell lung cancer.

Authors:  Ann G Schwartz; Michele L Cote; Angela S Wenzlaff; Susan Land; Christopher I Amos
Journal:  J Thorac Oncol       Date:  2009-10       Impact factor: 15.609

7.  Genome-wide association scans for secondary traits using case-control samples.

Authors:  Genevieve M Monsees; Rulla M Tamimi; Peter Kraft
Journal:  Genet Epidemiol       Date:  2009-12       Impact factor: 2.135

8.  Integration of genomic and genetic approaches implicates IREB2 as a COPD susceptibility gene.

Authors:  Dawn L DeMeo; Thomas Mariani; Soumyaroop Bhattacharya; Sorachai Srisuma; Christoph Lange; Augusto Litonjua; Raphael Bueno; Sreekumar G Pillai; David A Lomas; David Sparrow; Steven D Shapiro; Gerard J Criner; Hong P Kim; Zhihua Chen; Augustine M K Choi; John Reilly; Edwin K Silverman
Journal:  Am J Hum Genet       Date:  2009-10       Impact factor: 11.025

9.  Genome-wide association study identifies five loci associated with lung function.

Authors:  Emmanouela Repapi; Ian Sayers; Louise V Wain; Paul R Burton; Toby Johnson; Ma'en Obeidat; Jing Hua Zhao; Adaikalavan Ramasamy; Guangju Zhai; Veronique Vitart; Jennifer E Huffman; Wilmar Igl; Eva Albrecht; Panos Deloukas; John Henderson; Raquel Granell; Wendy L McArdle; Alicja R Rudnicka; Inês Barroso; Ruth J F Loos; Nicholas J Wareham; Linda Mustelin; Taina Rantanen; Ida Surakka; Medea Imboden; H Erich Wichmann; Ivica Grkovic; Stipan Jankovic; Lina Zgaga; Anna-Liisa Hartikainen; Leena Peltonen; Ulf Gyllensten; Asa Johansson; Ghazal Zaboli; Harry Campbell; Sarah H Wild; James F Wilson; Sven Gläser; Georg Homuth; Henry Völzke; Massimo Mangino; Nicole Soranzo; Tim D Spector; Ozren Polasek; Igor Rudan; Alan F Wright; Markku Heliövaara; Samuli Ripatti; Anneli Pouta; Asa Torinsson Naluai; Anna-Carin Olin; Kjell Torén; Matthew N Cooper; Alan L James; Lyle J Palmer; Aroon D Hingorani; S Goya Wannamethee; Peter H Whincup; George Davey Smith; Shah Ebrahim; Tricia M McKeever; Ian D Pavord; Andrew K MacLeod; Andrew D Morris; David J Porteous; Cyrus Cooper; Elaine Dennison; Seif Shaheen; Stefan Karrasch; Eva Schnabel; Holger Schulz; Harald Grallert; Nabila Bouatia-Naji; Jérôme Delplanque; Philippe Froguel; John D Blakey; John R Britton; Richard W Morris; John W Holloway; Debbie A Lawlor; Jennie Hui; Fredrik Nyberg; Marjo-Riitta Jarvelin; Cathy Jackson; Mika Kähönen; Jaakko Kaprio; Nicole M Probst-Hensch; Beate Koch; Caroline Hayward; David M Evans; Paul Elliott; David P Strachan; Ian P Hall; Martin D Tobin
Journal:  Nat Genet       Date:  2009-12-13       Impact factor: 38.330

10.  Meta-analyses of genome-wide association studies identify multiple loci associated with pulmonary function.

Authors:  Dana B Hancock; Mark Eijgelsheim; Jemma B Wilk; Sina A Gharib; Laura R Loehr; Kristin D Marciante; Nora Franceschini; Yannick M T A van Durme; Ting-Hsu Chen; R Graham Barr; Matthew B Schabath; David J Couper; Guy G Brusselle; Bruce M Psaty; Cornelia M van Duijn; Jerome I Rotter; André G Uitterlinden; Albert Hofman; Naresh M Punjabi; Fernando Rivadeneira; Alanna C Morrison; Paul L Enright; Kari E North; Susan R Heckbert; Thomas Lumley; Bruno H C Stricker; George T O'Connor; Stephanie J London
Journal:  Nat Genet       Date:  2009-12-13       Impact factor: 41.307

View more
  46 in total

1.  Understanding the role of the chromosome 15q25.1 in COPD through epigenetics and transcriptomics.

Authors:  Ivana Nedeljkovic; Elena Carnero-Montoro; Lies Lahousse; Diana A van der Plaat; Kim de Jong; Judith M Vonk; Cleo C van Diemen; Alen Faiz; Maarten van den Berge; Ma'en Obeidat; Yohan Bossé; David C Nickle; Bios Consortium; Andre G Uitterlinden; Joyce J B van Meurs; Bruno C H Stricker; Guy G Brusselle; Dirkje S Postma; H Marike Boezen; Cornelia M van Duijn; Najaf Amin
Journal:  Eur J Hum Genet       Date:  2018-02-08       Impact factor: 4.246

2.  DNA methylation profiling in human lung tissue identifies genes associated with COPD.

Authors:  Jarrett D Morrow; Michael H Cho; Craig P Hersh; Victor Pinto-Plata; Bartolome Celli; Nathaniel Marchetti; Gerard Criner; Raphael Bueno; George Washko; Kimberly Glass; Augustine M K Choi; John Quackenbush; Edwin K Silverman; Dawn L DeMeo
Journal:  Epigenetics       Date:  2016-11-01       Impact factor: 4.528

3.  Chronic Obstructive Pulmonary Disease Genetics: A Review of the Past and a Look Into the Future.

Authors:  Megan Hardin; Edwin K Silverman
Journal:  Chronic Obstr Pulm Dis       Date:  2014-05-06

Review 4.  Nutritional immunity: the impact of metals on lung immune cells and the airway microbiome during chronic respiratory disease.

Authors:  Claire Healy; Natalia Munoz-Wolf; Janné Strydom; Lynne Faherty; Niamh C Williams; Sarah Kenny; Seamas C Donnelly; Suzanne M Cloonan
Journal:  Respir Res       Date:  2021-04-29

5.  Genome-wide association study identifies TH1 pathway genes associated with lung function in asthmatic patients.

Authors:  Xingnan Li; Gregory A Hawkins; Elizabeth J Ampleford; Wendy C Moore; Huashi Li; Annette T Hastie; Timothy D Howard; Homer A Boushey; William W Busse; William J Calhoun; Mario Castro; Serpil C Erzurum; Elliot Israel; Robert F Lemanske; Stanley J Szefler; Stephen I Wasserman; Sally E Wenzel; Stephen P Peters; Deborah A Meyers; Eugene R Bleecker
Journal:  J Allergy Clin Immunol       Date:  2013-03-28       Impact factor: 10.793

6.  Molecular cloning, sequence identification, and gene expression analysis of bovine ADCY2 gene.

Authors:  Y X Li; H G Jin; C G Yan; C Y Ren; C J Jiang; C D Jin; K S Seo; X Jin
Journal:  Mol Biol Rep       Date:  2014-05-06       Impact factor: 2.316

7.  Integrating Multiple Correlated Phenotypes for Genetic Association Analysis by Maximizing Heritability.

Authors:  Jin J Zhou; Michael H Cho; Christoph Lange; Sharon Lutz; Edwin K Silverman; Nan M Laird
Journal:  Hum Hered       Date:  2015-06-20       Impact factor: 0.444

8.  Hepcidin Is Essential for Alveolar Macrophage Function and Is Disrupted by Smoke in a Murine Chronic Obstructive Pulmonary Disease Model.

Authors:  Elizabeth Perez; Jonathan R Baker; Silvana Di Giandomenico; Pouneh Kermani; Jacqueline Parker; Kihwan Kim; Jianjun Yang; Peter J Barnes; Sophie Vaulont; Joseph M Scandura; Louise E Donnelly; Heather Stout-Delgado; Suzanne M Cloonan
Journal:  J Immunol       Date:  2020-09-21       Impact factor: 5.422

Review 9.  Heterogeneity of chronic obstructive pulmonary disease: from phenotype to genotype.

Authors:  Xu Chen; Xiaomao Xu; Fei Xiao
Journal:  Front Med       Date:  2013-12       Impact factor: 4.592

10.  Epac1 and Epac2 are differentially involved in inflammatory and remodeling processes induced by cigarette smoke.

Authors:  Anouk Oldenburger; Wim Timens; Sophie Bos; Marieke Smit; Alan V Smrcka; Anne-Coline Laurent; Junjun Cao; Machteld Hylkema; Herman Meurs; Harm Maarsingh; Frank Lezoualc'h; Martina Schmidt
Journal:  FASEB J       Date:  2014-08-07       Impact factor: 5.191

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.