Literature DB >> 22460038

A rapid label-free method for quantitation of human immunodeficiency virus type-1 particles by nanospectroscopy.

Olivia Block1, Anirban Mitra, Lukas Novotny, Carrie Dykes.   

Abstract

Infection of cells with human immunodeficiency virus type-1 (HIV-1) results in the production of both infectious and non-infectious virions. At present, several assays are available for the quantitation of virus particles based on the presence of either viral capsid protein or nucleic acid. However, the ability to detect the total number of virus particles, both infectious and non-infectious, has been an elusive goal that would advance the study of virus assembly and egress. A rapid optical detection scheme for real-time label-free quantitation of HIV-1 virus particles was developed. Virions produced in cell cultures transfected transiently were evaluated with a nanospectroscopic assay. Quantitation with the optical detection scheme correlated with routine conventional assays. Nanospectroscopy can be used for the detection of both infectious and non-infectious, wild type and mutant strains of HIV-1 in solution at concentrations as low as 7×10(10)particles/ml, requiring volumes as small as 2 μl per assay, and in significantly less time than standard techniques. This assay provides a rapid, reliable system for quantifying virus particles in solution and could be applied to the study of viral particle production in cell culture.
Copyright © 2012 Elsevier B.V. All rights reserved.

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Year:  2012        PMID: 22460038      PMCID: PMC3334412          DOI: 10.1016/j.jviromet.2012.03.012

Source DB:  PubMed          Journal:  J Virol Methods        ISSN: 0166-0934            Impact factor:   2.014


  28 in total

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Authors:  Kenichi Niikura; Keita Nagakawa; Noriko Ohtake; Tadaki Suzuki; Yasutaka Matsuo; Hirofumi Sawa; Kuniharu Ijiro
Journal:  Bioconjug Chem       Date:  2009-09-11       Impact factor: 4.774

2.  High sensitivity nanoparticle detection using optical microcavities.

Authors:  Tao Lu; Hansuek Lee; Tong Chen; Steven Herchak; Ji-Hun Kim; Scott E Fraser; Richard C Flagan; Kerry Vahala
Journal:  Proc Natl Acad Sci U S A       Date:  2011-03-28       Impact factor: 11.205

3.  Optical microchip array biosensor for multiplexed detection of bio-hazardous agents.

Authors:  D Bhatta; A A Michel; M Marti Villalba; G D Emmerson; I J G Sparrow; E A Perkins; M B McDonnell; R W Ely; G A Cartwright
Journal:  Biosens Bioelectron       Date:  2011-09-03       Impact factor: 10.618

4.  One-step assay for detecting influenza virus using dynamic light scattering and gold nanoparticles.

Authors:  Jeremy D Driskell; Cheryl A Jones; S Mark Tompkins; Ralph A Tripp
Journal:  Analyst       Date:  2011-06-13       Impact factor: 4.616

5.  Nano-optofluidic detection of single viruses and nanoparticles.

Authors:  Anirban Mitra; Bradley Deutsch; Filipp Ignatovich; Carrie Dykes; Lukas Novotny
Journal:  ACS Nano       Date:  2010-03-23       Impact factor: 15.881

6.  Sequences in the U3 region of human immunodeficiency virus 1 improve efficiency of minus strand transfer in infected cells.

Authors:  Dorota Piekna-Przybylska; Carrie Dykes; Lisa M Demeter; Robert A Bambara
Journal:  Virology       Date:  2010-12-30       Impact factor: 3.616

7.  CD4+ T cells from elite suppressors are more susceptible to HIV-1 but produce fewer virions than cells from chronic progressors.

Authors:  Karen A O'Connell; S Alireza Rabi; Robert F Siliciano; Joel N Blankson
Journal:  Proc Natl Acad Sci U S A       Date:  2011-08-22       Impact factor: 11.205

Review 8.  The development of antiretroviral therapy and its impact on the HIV-1/AIDS pandemic.

Authors:  Samuel Broder
Journal:  Antiviral Res       Date:  2009-12-16       Impact factor: 5.970

9.  Optical detection of human papillomavirus type 16 and type 18 by sequence sandwich hybridization with oligonucleotide-functionalized Au nanoparticles.

Authors:  Sz-Hau Chen; Kun-I Lin; Chuan-Yi Tang; Sheng-Lung Peng; Yao-Chen Chuang; Yi-Rou Lin; Jui-Ping Wang; Chih-Sheng Lin
Journal:  IEEE Trans Nanobioscience       Date:  2009-06       Impact factor: 2.935

10.  Ion-abrasion scanning electron microscopy reveals surface-connected tubular conduits in HIV-infected macrophages.

Authors:  Adam E Bennett; Kedar Narayan; Dan Shi; Lisa M Hartnell; Karine Gousset; Haifeng He; Bradley C Lowekamp; Terry S Yoo; Donald Bliss; Eric O Freed; Sriram Subramaniam
Journal:  PLoS Pathog       Date:  2009-09-25       Impact factor: 6.823

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  7 in total

1.  Recognition-mediated particle detection under microfluidic flow with waveguide-coupled 2D photonic crystals: towards integrated photonic virus detectors.

Authors:  James E Baker; Rashmi Sriram; Benjamin L Miller
Journal:  Lab Chip       Date:  2017-05-02       Impact factor: 6.799

2.  Selective Isolation of Retroviruses from Extracellular Vesicles by Intact Virion Immunoprecipitation.

Authors:  Tyler Milston Renner; Kasandra Bélanger; Marc-André Langlois
Journal:  Bio Protoc       Date:  2018-09-05

Review 3.  Label-free detection and manipulation of single biological nanoparticles.

Authors:  Michael C DeSantis; Wei Cheng
Journal:  Wiley Interdiscip Rev Nanomed Nanobiotechnol       Date:  2016-02-05

4.  Membrane Fluidity Sensing on the Single Virus Particle Level with Plasmonic Nanoparticle Transducers.

Authors:  Amin Feizpour; David Stelter; Crystal Wong; Hisashi Akiyama; Suryaram Gummuluru; Tom Keyes; Björn M Reinhard
Journal:  ACS Sens       Date:  2017-10-04       Impact factor: 9.618

5.  Using optical trap to measure the refractive index of a single animal virus in culture fluid with high precision.

Authors:  Yuanjie Pang; Hanna Song; Wei Cheng
Journal:  Biomed Opt Express       Date:  2016-04-04       Impact factor: 3.732

6.  Electron-Beam-Lithographed Nanostructures as Reference Materials for Label-Free Scattered-Light Biosensing of Single Filoviruses.

Authors:  Anant Agrawal; Joseph Majdi; Kathleen A Clouse; Tzanko Stantchev
Journal:  Sensors (Basel)       Date:  2018-05-23       Impact factor: 3.576

Review 7.  Analytical technologies for influenza virus-like particle candidate vaccines: challenges and emerging approaches.

Authors:  Christine M Thompson; Emma Petiot; Alexandre Lennaertz; Olivier Henry; Amine A Kamen
Journal:  Virol J       Date:  2013-05-04       Impact factor: 4.099

  7 in total

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