Literature DB >> 22459165

Cluster analysis of rat olfactory bulb responses to diverse odorants.

Matteo Falasconi1, Agustin Gutierrez-Galvez, Michael Leon, Brett A Johnson, Santiago Marco.   

Abstract

In an effort to deepen our understanding of mammalian olfactory coding, we have used an objective method to analyze a large set of odorant-evoked activity maps collected systematically across the rat olfactory bulb to determine whether such an approach could identify specific glomerular regions that are activated by related odorants. To that end, we combined fuzzy c-means clustering methods with a novel validity approach based on cluster stability to evaluate the significance of the fuzzy partitions on a data set of glomerular layer responses to a large diverse group of odorants. Our results confirm the existence of glomerular response clusters to similar odorants. They further indicate a partial hierarchical chemotopic organization wherein larger glomerular regions can be subdivided into smaller areas that are rather specific in their responses to particular functional groups of odorants. These clusters bear many similarities to, as well as some differences from, response domains previously proposed for the glomerular layer of the bulb. These data also provide additional support for the concept of an identity code in the mammalian olfactory system.

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Year:  2012        PMID: 22459165      PMCID: PMC3529619          DOI: 10.1093/chemse/bjs045

Source DB:  PubMed          Journal:  Chem Senses        ISSN: 0379-864X            Impact factor:   3.160


  32 in total

1.  A zonal organization of odorant receptor gene expression in the olfactory epithelium.

Authors:  K J Ressler; S L Sullivan; L B Buck
Journal:  Cell       Date:  1993-05-07       Impact factor: 41.582

2.  An artificial neural network approach for glomerular activity pattern prediction using the graph kernel method and the gaussian mixture functions.

Authors:  Zu Soh; Toshio Tsuji; Noboru Takiguchi; Hisao Ohtake
Journal:  Chem Senses       Date:  2011-02-22       Impact factor: 3.160

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Authors:  G M Shepherd
Journal:  Ann N Y Acad Sci       Date:  1987       Impact factor: 5.691

4.  Spatial segregation of odorant receptor expression in the mammalian olfactory epithelium.

Authors:  R Vassar; J Ngai; R Axel
Journal:  Cell       Date:  1993-07-30       Impact factor: 41.582

5.  On the ability of rats to discriminate between microstimulations of the olfactory bulb in different locations.

Authors:  A M Mouly; M Vigouroux; A Holley
Journal:  Behav Brain Res       Date:  1985-09       Impact factor: 3.332

Review 6.  Olfactory coding in the mammalian olfactory bulb.

Authors:  Michael Leon; Brett A Johnson
Journal:  Brain Res Brain Res Rev       Date:  2003-04

7.  Specificity of glomerular targeting by olfactory sensory axons.

Authors:  Helen B Treloar; Paul Feinstein; Peter Mombaerts; Charles A Greer
Journal:  J Neurosci       Date:  2002-04-01       Impact factor: 6.167

8.  Modular representations of odorants in the glomerular layer of the rat olfactory bulb and the effects of stimulus concentration.

Authors:  B A Johnson; M Leon
Journal:  J Comp Neurol       Date:  2000-07-10       Impact factor: 3.215

9.  Perceptive properties of the multi-site electrical microstimulation of the olfactory bulb in the rat.

Authors:  A M Mouly; A Holley
Journal:  Behav Brain Res       Date:  1986-07       Impact factor: 3.332

10.  In vivo imaging of neuronal activity by targeted expression of a genetically encoded probe in the mouse.

Authors:  Thomas Bozza; John P McGann; Peter Mombaerts; Matt Wachowiak
Journal:  Neuron       Date:  2004-04-08       Impact factor: 17.173

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  4 in total

1.  Characterizing olfactory perceptual similarity using carbon chain discrimination in Fischer 344 rats.

Authors:  Wendy M Yoder; Barry Setlow; Jennifer L Bizon; David W Smith
Journal:  Chem Senses       Date:  2014-01-31       Impact factor: 3.160

2.  Interaction between age and perceptual similarity in olfactory discrimination learning in F344 rats: relationships with spatial learning.

Authors:  Wendy M Yoder; Leslie S Gaynor; Sara N Burke; Barry Setlow; David W Smith; Jennifer L Bizon
Journal:  Neurobiol Aging       Date:  2017-02-07       Impact factor: 4.673

3.  In vivo identification of eugenol-responsive and muscone-responsive mouse odorant receptors.

Authors:  Timothy S McClintock; Kaylin Adipietro; William B Titlow; Patrick Breheny; Andreas Walz; Peter Mombaerts; Hiroaki Matsunami
Journal:  J Neurosci       Date:  2014-11-19       Impact factor: 6.167

4.  Keeping their distance? Odor response patterns along the concentration range.

Authors:  Martin Strauch; Mathias Ditzen; C Giovanni Galizia
Journal:  Front Syst Neurosci       Date:  2012-10-18
  4 in total

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