Literature DB >> 22458566

Next-generation community genetics for low- and middle-income countries.

Stephen F Kingsmore1, John D Lantos1, Darrell L Dinwiddie1, Neil A Miller1, Sarah E Soden1, Emily G Farrow1, Carol J Saunders1.   

Abstract

A recent report by the World Health Organization calls for implementation of community genetics programs in low- and middle-income countries (LMICs). Their focus is prevention of congenital disorders and genetic diseases at the population level, in addition to providing genetics services, including diagnosis and counseling. The proposed strategies include both newborn screening and population screening for carrier detection, in addition to lowering the incidence of congenital disorders and genetic diseases through the removal of environmental factors. In this article, we consider the potential impact of such testing on global health and highlight the near-term relevance of next-generation sequencing (NGS) and bioinformatic approaches to their implementation. Key attributes of NGS for community genetics programs are homogeneous approach, high multiplexing of diseases and samples, as well as rapidly falling costs of new technologies. In the near future, we estimate that appropriate use of population-specific test panels could cost as little as $10 for 10 Mendelian disorders and could have a major impact on diseases that currently affect 2% of children worldwide. However, the successful deployment of this technological innovation in LMICs will require high value for human life, thoughtful implementation, and autonomy of individual decisions, supported by appropriate genetic counseling and community education.

Entities:  

Keywords:  Community genetics; Mendelian disease; low income countries; multiplexing; newborn screening; next-generation sequencing; preconception carrier testing

Year:  2012        PMID: 22458566      PMCID: PMC3446275          DOI: 10.1186/gm324

Source DB:  PubMed          Journal:  Genome Med        ISSN: 1756-994X            Impact factor:   11.117


  43 in total

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2.  A universal carrier test for the long tail of Mendelian disease.

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Review 3.  Application of medical genetics in Turkey.

Authors:  Ergül Tunçbilek; Meral Ozgüç
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4.  'Rakter dosh'--corrupting blood: The challenges of preventing thalassemia in Bengal, India.

Authors:  Sreeparna Chattopadhyay
Journal:  Soc Sci Med       Date:  2006-08-09       Impact factor: 4.634

5.  The consequences of consanguinity on the rates of malformations and major medical conditions at birth and in early childhood in inbred populations.

Authors:  Joël Zlotogora; Stavit A Shalev
Journal:  Am J Med Genet A       Date:  2010-08       Impact factor: 2.802

6.  Sickle cell anemia in northern Israel: screening and prevention.

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Journal:  Isr Med Assoc J       Date:  2009-04       Impact factor: 0.892

7.  Tay-Sachs disease--carrier screening, prenatal diagnosis, and the molecular era. An international perspective, 1970 to 1993. The International TSD Data Collection Network.

Authors:  M Kaback; J Lim-Steele; D Dabholkar; D Brown; N Levy; K Zeiger
Journal:  JAMA       Date:  1993-11-17       Impact factor: 56.272

Review 8.  Population programs for the detection of couples at risk for severe monogenic genetic diseases.

Authors:  Joël Zlotogora
Journal:  Hum Genet       Date:  2009-04-24       Impact factor: 4.132

Review 9.  Genetic clinics in arab communities: meeting individual, family and community needs.

Authors:  H Hamamy; A H Bittles
Journal:  Public Health Genomics       Date:  2008-09-03       Impact factor: 2.000

10.  Newborn screening: toward a uniform screening panel and system.

Authors: 
Journal:  Genet Med       Date:  2006-05       Impact factor: 8.822

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  19 in total

Review 1.  Genomic medicine for kidney disease.

Authors:  Emily E Groopman; Hila Milo Rasouly; Ali G Gharavi
Journal:  Nat Rev Nephrol       Date:  2018-01-08       Impact factor: 28.314

2.  Identifying opportunities for collaboration and growth of genetic counseling services in the Asia Region.

Authors:  Mercy Y Laurino; Darci L Sternen; Jennifer K Thompson; Kathleen A Leppig
Journal:  J Community Genet       Date:  2017-05-25

3.  Ethical, social, and cultural issues related to clinical genetic testing and counseling in low- and middle-income countries: a systematic review.

Authors:  Adrina Zhong; Benedict Darren; Bethina Loiseau; Li Qun Betty He; Trillium Chang; Jessica Hill; Helen Dimaras
Journal:  Genet Med       Date:  2018-08-03       Impact factor: 8.822

4.  Healthcare professionals' perceptions of implementing a decision support intervention for cascade screening for beta-thalassemia in Pakistan.

Authors:  Shenaz Ahmed; Hussain Jafri; Wajeeha Naseer Ahmed; Muhammed Faran; Yasmin Rashid; Yasmin Ehsan; Mushtaq Ahmed
Journal:  Eur J Hum Genet       Date:  2022-03-01       Impact factor: 5.351

5.  Swedish parents' interest in preconception genetic carrier screening.

Authors:  Maria Ekstrand Ragnar; Tanja Tydén; Ulrik Kihlbom; Margareta Larsson
Journal:  Ups J Med Sci       Date:  2016-09-20       Impact factor: 2.384

6.  Ethical, social, and cultural issues related to clinical genetic testing and counseling in low- and middle-income countries: protocol for a systematic review.

Authors:  Adrina Zhong; Benedict Darren; Helen Dimaras
Journal:  Syst Rev       Date:  2017-07-11

7.  Neonatal Screening: Cost-utility Analysis for Galactosemia.

Authors:  Nahid Hatam; Mehrdad Askarian; Samad Shirvani; Elham Siavashi
Journal:  Iran J Public Health       Date:  2017-01       Impact factor: 1.429

8.  Genomic diagnostics within a medically underserved population: efficacy and implications.

Authors:  Kevin A Strauss; Claudia Gonzaga-Jauregui; Karlla W Brigatti; Katie B Williams; Alejandra K King; Cristopher Van Hout; Donna L Robinson; Millie Young; Kavita Praveen; Adam D Heaps; Mindy Kuebler; Aris Baras; Jeffrey G Reid; John D Overton; Frederick E Dewey; Robert N Jinks; Ian Finnegan; Scott J Mellis; Alan R Shuldiner; Erik G Puffenberger
Journal:  Genet Med       Date:  2017-07-20       Impact factor: 8.822

9.  Interpretations of education about gene-environment influences on health in rural Ethiopia: the context of a neglected tropical disease.

Authors:  Abebayehu Tora; Desta Ayode; Getnet Tadele; David Farrell; Gail Davey; Colleen M McBride
Journal:  Int Health       Date:  2016-04-24       Impact factor: 2.473

10.  Whole exome sequencing in neurogenetic odysseys: An effective, cost- and time-saving diagnostic approach.

Authors:  Marta Córdoba; Sergio Alejandro Rodriguez-Quiroga; Patricia Analía Vega; Valeria Salinas; Josefina Perez-Maturo; Hernán Amartino; Cecilia Vásquez-Dusefante; Nancy Medina; Dolores González-Morón; Marcelo Andrés Kauffman
Journal:  PLoS One       Date:  2018-02-01       Impact factor: 3.240

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