Literature DB >> 22453011

Molecular testing in melanoma.

Melissa Ann Wilson1, Katherine L Nathanson.   

Abstract

Melanoma is the deadliest form of skin cancer and is increasing in incidence. Recent treatment advances have been made, but there remains a need for continued development of effective therapy options, as treatment rarely leads to cure. Many melanomas contain somatic mutations involved in tumor pathogenesis. Accurate identification of these mutations is necessary to stratify patients for the purpose of treatment and potential for clinical trials, given the absence or presence of a specific mutation. There are a number of techniques available that will identify genetic mutations and genomic aberrations present within melanoma tumor samples which are reviewed here. The type of mutation and sample number will drive selection of a given mutation detection strategy. The strengths and weaknesses, along with limitations, of the various methods will also be discussed. The discovery of somatic mutations integral in melanoma will increase our understanding of tumor pathogenesis and should facilitate identification of mutations relevant to clinical treatment decisions, advancing progress toward personalized medicine.

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Year:  2012        PMID: 22453011      PMCID: PMC3578710          DOI: 10.1097/PPO.0b013e31824f11bf

Source DB:  PubMed          Journal:  Cancer J        ISSN: 1528-9117            Impact factor:   3.360


  90 in total

1.  Epigenetic PTEN silencing in malignant melanomas without PTEN mutation.

Authors:  X P Zhou; O Gimm; H Hampel; T Niemann; M J Walker; C Eng
Journal:  Am J Pathol       Date:  2000-10       Impact factor: 4.307

Review 2.  New applications and developments in the use of multiplex ligation-dependent probe amplification.

Authors:  Piotr Kozlowski; Anna J Jasinska; David J Kwiatkowski
Journal:  Electrophoresis       Date:  2008-12       Impact factor: 3.535

3.  Examination of mutations in BRAF, NRAS, and PTEN in primary cutaneous melanoma.

Authors:  Vikas K Goel; Alexander J F Lazar; Carla L Warneke; Mark S Redston; Frank G Haluska
Journal:  J Invest Dermatol       Date:  2006-01       Impact factor: 8.551

Review 4.  Whole cancer genome sequencing by next-generation methods.

Authors:  Jeffrey S Ross; Maureen Cronin
Journal:  Am J Clin Pathol       Date:  2011-10       Impact factor: 2.493

5.  Exome sequencing identifies recurrent somatic MAP2K1 and MAP2K2 mutations in melanoma.

Authors:  Sergey I Nikolaev; Donata Rimoldi; Christian Iseli; Armand Valsesia; Daniel Robyr; Corinne Gehrig; Keith Harshman; Michel Guipponi; Olesya Bukach; Vincent Zoete; Olivier Michielin; Katja Muehlethaler; Daniel Speiser; Jacques S Beckmann; Ioannis Xenarios; Thanos D Halazonetis; C Victor Jongeneel; Brian J Stevenson; Stylianos E Antonarakis
Journal:  Nat Genet       Date:  2011-12-25       Impact factor: 38.330

6.  A comprehensive catalogue of somatic mutations from a human cancer genome.

Authors:  Erin D Pleasance; R Keira Cheetham; Philip J Stephens; David J McBride; Sean J Humphray; Chris D Greenman; Ignacio Varela; Meng-Lay Lin; Gonzalo R Ordóñez; Graham R Bignell; Kai Ye; Julie Alipaz; Markus J Bauer; David Beare; Adam Butler; Richard J Carter; Lina Chen; Anthony J Cox; Sarah Edkins; Paula I Kokko-Gonzales; Niall A Gormley; Russell J Grocock; Christian D Haudenschild; Matthew M Hims; Terena James; Mingming Jia; Zoya Kingsbury; Catherine Leroy; John Marshall; Andrew Menzies; Laura J Mudie; Zemin Ning; Tom Royce; Ole B Schulz-Trieglaff; Anastassia Spiridou; Lucy A Stebbings; Lukasz Szajkowski; Jon Teague; David Williamson; Lynda Chin; Mark T Ross; Peter J Campbell; David R Bentley; P Andrew Futreal; Michael R Stratton
Journal:  Nature       Date:  2009-12-16       Impact factor: 49.962

7.  Isolation by polymerase chain reaction of a cDNA whose product partially complements the ultraviolet sensitivity of xeroderma pigmentosum group C cells.

Authors:  T Teitz; M Penner; D Eli; M Stark; M Bakhanashvili; T Naiman; D Canaani
Journal:  Gene       Date:  1990-03-15       Impact factor: 3.688

Review 8.  Melanoma: molecular pathogenesis and emerging target therapies (Review).

Authors:  Alessia E Russo; Elena Torrisi; Ylenia Bevelacqua; Rosario Perrotta; Massimo Libra; James A McCubrey; Demetrios A Spandidos; Franca Stivala; Grazia Malaponte
Journal:  Int J Oncol       Date:  2009-06       Impact factor: 5.650

9.  Activity of dasatinib against L576P KIT mutant melanoma: molecular, cellular, and clinical correlates.

Authors:  Scott E Woodman; Jonathan C Trent; Katherine Stemke-Hale; Alexander J Lazar; Sabrina Pricl; Giovanni M Pavan; Maurizio Fermeglia; Y N Vashisht Gopal; Dan Yang; Donald A Podoloff; Doina Ivan; Kevin B Kim; Nicholas Papadopoulos; Patrick Hwu; Gordon B Mills; Michael A Davies
Journal:  Mol Cancer Ther       Date:  2009-08-11       Impact factor: 6.261

10.  Pyrosequencing method to detect KRAS mutation in formalin-fixed and paraffin-embedded tumor tissues.

Authors:  Sandrine Dufort; Marie-Jeanne Richard; Florence de Fraipont
Journal:  Anal Biochem       Date:  2009-05-21       Impact factor: 3.365

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  5 in total

1.  A meta-analysis of somatic mutations from next generation sequencing of 241 melanomas: a road map for the study of genes with potential clinical relevance.

Authors:  Junfeng Xia; Peilin Jia; Katherine E Hutchinson; Kimberly B Dahlman; Douglas Johnson; Jeffrey Sosman; William Pao; Zhongming Zhao
Journal:  Mol Cancer Ther       Date:  2014-04-22       Impact factor: 6.261

Review 2.  Clinical Pharmacokinetic and Pharmacodynamic Considerations in the (Modern) Treatment of Melanoma.

Authors:  Hannah Yejin Kim; Parth J Upadhyay; Alia Fahmy; Xiaoman Liu; Janna K Duong; Alan V Boddy
Journal:  Clin Pharmacokinet       Date:  2019-08       Impact factor: 6.447

3.  Comparison between two widely used laboratory methods in BRAF V600 mutation detection in a large cohort of clinical samples of cutaneous melanoma metastases to the lymph nodes.

Authors:  Monika Jurkowska; Aleksandra Gos; Konrad Ptaszyński; Wanda Michej; Andrzej Tysarowski; Renata Zub; Janusz A Siedlecki; Piotr Rutkowski
Journal:  Int J Clin Exp Pathol       Date:  2015-07-01

4.  Sensitivity and Usefulness of VE1 Immunohistochemical Staining in Acral Melanomas with BRAF Mutation.

Authors:  Min Song Suh; Yoo Duk Choi; Jee-Bum Lee; Seung-Chul Lee; Young Ho Won; Sook Jung Yun
Journal:  Ann Dermatol       Date:  2018-08-28       Impact factor: 1.444

5.  Validation of the VE1 immunostain for the BRAF V600E mutation in melanoma.

Authors:  Michelle V Pearlstein; Daniel C Zedek; David W Ollila; Amanda Treece; Margaret L Gulley; Pamela A Groben; Nancy E Thomas
Journal:  J Cutan Pathol       Date:  2014-07-04       Impact factor: 1.587

  5 in total

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