Literature DB >> 22452512

Model of a six immunoglobulin-like domain fragment of filamin A (16-21) built using residual dipolar couplings.

Helena Tossavainen1, Outi Koskela, Pengju Jiang, Jari Ylänne, Iain D Campbell, Ilkka Kilpeläinen, Perttu Permi.   

Abstract

Filamins are actin-binding proteins that participate in a wide range of cell functions, including cell morphology, locomotion, membrane protein localization, and intracellular signaling. The three filamin isoforms found in humans, filamins A, B, and C, are highly homologous, and their roles are partly complementary. In addition to actin, filamins interact with dozens of other proteins that have roles as membrane receptors and channels, enzymes, signaling intermediates, and transcription factors. Filamins are composed of an N-terminal actin-binding domain and 24 filamin-type immunoglobulin-like domains (FLN) that form tail-to-tail dimers with their C-terminal FLN domain. Many of the filamin interactions including those for glycoprotein Ibα and integrins have been mapped to the region comprising FLN domains 16-21. Traditionally, FLN domains have been viewed as independent folding units, arranged in a linear chain joined with flexible linkers. Recent structural findings have shown that consecutive FLNs form more intricate superstructures. The crystal structure of filamin A domains 19-21 (FLNa19-21) revealed that domains 20 and 21 fold together and that the domain interaction can be autoregulatory. The solution structure of domains 18-19 showed a similar domain interaction, whereas domain pair 16-17 has a completely different domain packing mode. In this study, we characterize the domain organization of the FLNa domain sextet 16-21 using NMR spectroscopy. A structure model of this 60-kDa protein has been built using residual dipolar coupling restraints. RDCs and (15)N relaxation data have been used to characterize interdomain motions.
© 2012 American Chemical Society

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Year:  2012        PMID: 22452512     DOI: 10.1021/ja2114882

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  10 in total

1.  Decoding the components of dynamics in three-domain proteins.

Authors:  Mateusz Maciejewski; Paul N Barlow; Nico Tjandra
Journal:  J Comput Chem       Date:  2013-12-09       Impact factor: 3.376

2.  Electron microscopy and 3D reconstruction reveals filamin Ig domain binding to F-actin.

Authors:  Worawit Suphamungmee; Fumihiko Nakamura; John H Hartwig; William Lehman
Journal:  J Mol Biol       Date:  2012-10-04       Impact factor: 5.469

3.  An adventitious interaction of filamin A with RhoGDI2(Tyr153Glu).

Authors:  Mia Song; Qianjing He; Benjamin-Andreas Berk; John H Hartwig; Thomas P Stossel; Fumihiko Nakamura
Journal:  Biochem Biophys Res Commun       Date:  2015-12-17       Impact factor: 3.575

4.  Domain-domain interactions in filamin A (16-23) impose a hierarchy of unfolding forces.

Authors:  Tianyou Xu; Herbert Lannon; Sébastein Wolf; Fumihiko Nakamura; Jasna Brujic
Journal:  Biophys J       Date:  2013-05-07       Impact factor: 4.033

5.  Documentation and localization of force-mediated filamin A domain perturbations in moving cells.

Authors:  Fumihiko Nakamura; Mia Song; John H Hartwig; Thomas P Stossel
Journal:  Nat Commun       Date:  2014-08-14       Impact factor: 14.919

6.  HspB1 phosphorylation regulates its intramolecular dynamics and mechanosensitive molecular chaperone interaction with filamin C.

Authors:  Miranda P Collier; T Reid Alderson; Carin P de Villiers; Daisy Nicholls; Heidi Y Gastall; Timothy M Allison; Matteo T Degiacomi; He Jiang; Georg Mlynek; Dieter O Fürst; Peter F M van der Ven; Kristina Djinovic-Carugo; Andrew J Baldwin; Hugh Watkins; Katja Gehmlich; Justin L P Benesch
Journal:  Sci Adv       Date:  2019-05-22       Impact factor: 14.136

7.  Flexible Structure of Peptide-Bound Filamin A Mechanosensor Domain Pair 20-21.

Authors:  Jonne Seppälä; Helena Tossavainen; Nebojsa Rodic; Perttu Permi; Ulla Pentikäinen; Jari Ylänne
Journal:  PLoS One       Date:  2015-08-31       Impact factor: 3.240

8.  Small-angle X-ray scattering reveals compact domain-domain interactions in the N-terminal region of filamin C.

Authors:  Ritika Sethi; Jari Ylänne
Journal:  PLoS One       Date:  2014-09-22       Impact factor: 3.240

Review 9.  Structure and Function of Filamin C in the Muscle Z-Disc.

Authors:  Zhenfeng Mao; Fumihiko Nakamura
Journal:  Int J Mol Sci       Date:  2020-04-13       Impact factor: 5.923

Review 10.  Sparse labeling of proteins: structural characterization from long range constraints.

Authors:  James H Prestegard; David A Agard; Kelley W Moremen; Laura A Lavery; Laura C Morris; Kari Pederson
Journal:  J Magn Reson       Date:  2014-04       Impact factor: 2.229

  10 in total

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