Literature DB >> 22451107

Nitrous oxide production and consumption: regulation of gene expression by gas-sensitive transcription factors.

Stephen Spiro1.   

Abstract

Several biochemical mechanisms contribute to the biological generation of nitrous oxide (N(2)O). N(2)O generating enzymes include the respiratory nitric oxide (NO) reductase, an enzyme from the flavo-diiron family, and flavohaemoglobin. On the other hand, there is only one enzyme that is known to use N(2)O as a substrate, which is the respiratory N(2)O reductase typically found in bacteria capable of denitrification (the respiratory reduction of nitrate and nitrite to dinitrogen). This article will briefly review the properties of the enzymes that make and consume N(2)O, together with the accessory proteins that have roles in the assembly and maturation of those enzymes. The expression of the genes encoding the enzymes that produce and consume N(2)O is regulated by environmental signals (typically oxygen and NO) acting through regulatory proteins, which, either directly or indirectly, control the frequency of transcription initiation. The roles and mechanisms of these proteins, and the structures of the regulatory networks in which they participate will also be reviewed.

Entities:  

Mesh:

Substances:

Year:  2012        PMID: 22451107      PMCID: PMC3306620          DOI: 10.1098/rstb.2011.0309

Source DB:  PubMed          Journal:  Philos Trans R Soc Lond B Biol Sci        ISSN: 0962-8436            Impact factor:   6.237


  71 in total

1.  Characterization of the signaling domain of the NO-responsive regulator NorR from Ralstonia eutropha H16 by site-directed mutagenesis.

Authors:  Andrea Klink; Bettina Elsner; Katja Strube; Rainer Cramm
Journal:  J Bacteriol       Date:  2007-02-02       Impact factor: 3.490

2.  Analysis of the nitric oxide-sensing non-heme iron center in the NorR regulatory protein.

Authors:  Nicholas P Tucker; Benoît D'Autréaux; Faridoon K Yousafzai; Shirley A Fairhurst; Stephen Spiro; Ray Dixon
Journal:  J Biol Chem       Date:  2007-11-14       Impact factor: 5.157

Review 3.  Respiratory transformation of nitrous oxide (N2O) to dinitrogen by Bacteria and Archaea.

Authors:  Walter G Zumft; Peter M H Kroneck
Journal:  Adv Microb Physiol       Date:  2007       Impact factor: 3.517

4.  Coordinated regulation of the Neisseria gonorrhoeae-truncated denitrification pathway by the nitric oxide-sensitive repressor, NsrR, and nitrite-insensitive NarQ-NarP.

Authors:  Tim W Overton; Rebekah Whitehead; Ying Li; Lori A S Snyder; Nigel J Saunders; Harry Smith; Jeff A Cole
Journal:  J Biol Chem       Date:  2006-09-05       Impact factor: 5.157

5.  Escherichia coli di-iron YtfE protein is necessary for the repair of stress-damaged iron-sulfur clusters.

Authors:  Marta C Justino; Cláudia C Almeida; Miguel Teixeira; Lígia M Saraiva
Journal:  J Biol Chem       Date:  2007-02-07       Impact factor: 5.157

6.  NO sensing in Pseudomonas aeruginosa: structure of the transcriptional regulator DNR.

Authors:  Giorgio Giardina; Serena Rinaldo; Kenneth A Johnson; Adele Di Matteo; Maurizio Brunori; Francesca Cutruzzolà
Journal:  J Mol Biol       Date:  2008-03-14       Impact factor: 5.469

7.  Dominant role of the cbb3 oxidase in regulation of photosynthesis gene expression through the PrrBA system in Rhodobacter sphaeroides 2.4.1.

Authors:  Yong-Jin Kim; In-Jeong Ko; Jin-Mok Lee; Ho-Young Kang; Young Min Kim; Samuel Kaplan; Jeong-Il Oh
Journal:  J Bacteriol       Date:  2007-06-08       Impact factor: 3.490

8.  Two-pronged survival strategy for the major cystic fibrosis pathogen, Pseudomonas aeruginosa, lacking the capacity to degrade nitric oxide during anaerobic respiration.

Authors:  Sang Sun Yoon; Ahmet C Karabulut; John D Lipscomb; Robert F Hennigan; Sergei V Lymar; Stephanie L Groce; Andrew B Herr; Michael L Howell; Patricia J Kiley; Michael J Schurr; Benjamin Gaston; Kyoung-Hee Choi; Herbert P Schweizer; Daniel J Hassett
Journal:  EMBO J       Date:  2007-07-12       Impact factor: 11.598

9.  Formation of a dinitrosyl iron complex by NorA, a nitric oxide-binding di-iron protein from Ralstonia eutropha H16.

Authors:  Katja Strube; Simon de Vries; Rainer Cramm
Journal:  J Biol Chem       Date:  2007-05-16       Impact factor: 5.157

10.  Regulation of denitrification genes in Neisseria meningitidis by nitric oxide and the repressor NsrR.

Authors:  Jonathan D Rock; Melanie J Thomson; Robert C Read; James W B Moir
Journal:  J Bacteriol       Date:  2006-11-22       Impact factor: 3.490

View more
  27 in total

1.  Linked expressions of nap and nos genes in a Bradyrhizobium japonicum mutant with increased N(2)O reductase activity.

Authors:  Cristina Sánchez; Manabu Itakura; Hisayuki Mitsui; Kiwamu Minamisawa
Journal:  Appl Environ Microbiol       Date:  2013-04-26       Impact factor: 4.792

2.  Microbial N Transformations and N2O Emission after Simulated Grassland Cultivation: Effects of the Nitrification Inhibitor 3,4-Dimethylpyrazole Phosphate (DMPP).

Authors:  Yun-Feng Duan; Xian-Wang Kong; Andreas Schramm; Rodrigo Labouriau; Jørgen Eriksen; Søren O Petersen
Journal:  Appl Environ Microbiol       Date:  2016-12-15       Impact factor: 4.792

3.  The effect of pH on Marinobacter hydrocarbonoclasticus denitrification pathway and nitrous oxide reductase.

Authors:  Cíntia Carreira; Rute F Nunes; Olga Mestre; Isabel Moura; Sofia R Pauleta
Journal:  J Biol Inorg Chem       Date:  2020-08-26       Impact factor: 3.358

Review 4.  Biological sources and sinks of nitrous oxide and strategies to mitigate emissions.

Authors:  Andrew J Thomson; Georgios Giannopoulos; Jules Pretty; Elizabeth M Baggs; David J Richardson
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2012-05-05       Impact factor: 6.237

5.  Metagenomic Characterization of Soil Microbial Communities in the Luquillo Experimental Forest (Puerto Rico) and Implications for Nitrogen Cycling.

Authors:  Smruthi Karthikeyan; Luis H Orellana; Eric R Johnston; Janet K Hatt; Frank E Löffler; Héctor L Ayala-Del-Río; Grizelle González; Konstantinos T Konstantinidis
Journal:  Appl Environ Microbiol       Date:  2021-05-26       Impact factor: 4.792

6.  Visualization of mRNA Expression in Pseudomonas aeruginosa Aggregates Reveals Spatial Patterns of Fermentative and Denitrifying Metabolism.

Authors:  Jadzia Livingston; Melanie A Spero; Zachery R Lonergan; Dianne K Newman
Journal:  Appl Environ Microbiol       Date:  2022-05-19       Impact factor: 5.005

7.  Variable Inhibition of Nitrous Oxide Reduction in Denitrifying Bacteria by Different Forms of Methanobactin.

Authors:  Jin Chang; Peng Peng; Alan A DiSpirito; Jeremy D Semrau
Journal:  Appl Environ Microbiol       Date:  2022-03-14       Impact factor: 5.005

8.  Functional plasticity in oyster gut microbiomes along a eutrophication gradient in an urbanized estuary.

Authors:  Rebecca J Stevick; Anton F Post; Marta Gómez-Chiarri
Journal:  Anim Microbiome       Date:  2021-01-06

9.  Novel insights into the taxonomic diversity and molecular mechanisms of bacterial Mn(III) reduction.

Authors:  Nadia Szeinbaum; Brook L Nunn; Amanda R Cavazos; Sean A Crowe; Frank J Stewart; Thomas J DiChristina; Christopher T Reinhard; Jennifer B Glass
Journal:  Environ Microbiol Rep       Date:  2020-08-16       Impact factor: 4.006

10.  Computational analysis of LexA regulons in Proteus species.

Authors:  Yongzhong Lu; Linyue Cheng
Journal:  3 Biotech       Date:  2021-02-19       Impact factor: 2.406

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.