Literature DB >> 22447588

Denitrification and nitrogen fixation dynamics in the area surrounding an individual ghost shrimp (Neotrypaea californiensis) burrow system.

Victoria J Bertics1, Jill A Sohm, Cara Magnabosco, Wiebke Ziebis.   

Abstract

Bioturbated sediments are thought of as areas of increased denitrification or fixed-nitrogen (N) loss; however, recent studies have suggested that not all N may be lost from these environments, with some N returning to the system via microbial dinitrogen (N(2)) fixation. We investigated denitrification and N(2) fixation in an intertidal lagoon (Catalina Harbor, CA), an environment characterized by bioturbation by thalassinidean shrimp (Neotrypaea californiensis). Field studies were combined with detailed measurements of denitrification and N(2) fixation surrounding a single ghost shrimp burrow system in a narrow aquarium (15 cm by 20 cm by 5 cm). Simultaneous measurements of both activities were performed on samples taken within a 1.5-cm grid for a two-dimensional illustration of their intensity and distribution. These findings were then compared with rate measurements performed on bulk environmental sediment samples collected from the lagoon. Results for the aquarium indicated that both denitrification and N(2) fixation have a patchy distribution surrounding the burrow, with no clear correlation to each other, sediment depth, or distance from the burrow. Field denitrification rates were, on average, lower in a bioturbated region than in a seemingly nonbioturbated region; however, replicates showed very high variability. A comparison of denitrification field results with previously reported N(2) fixation rates from the same lagoon showed that in the nonbioturbated region, depth-integrated (10 cm) denitrification rates were higher than integrated N(2) fixation rates (∼9 to 50 times). In contrast, in the bioturbated sediments, depending on the year and bioturbation intensity, some (∼6.2%) to all of the N lost via denitrification might be accounted for via N(2) fixation.

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Year:  2012        PMID: 22447588      PMCID: PMC3346391          DOI: 10.1128/AEM.00114-12

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  15 in total

1.  Oceanography: a marine nitrogen cycle fix?

Authors:  Douglas G Capone; Angela N Knapp
Journal:  Nature       Date:  2007-01-11       Impact factor: 49.962

2.  Diversity of heterotrophic nitrogen fixation genes in a marine cyanobacterial mat.

Authors:  J P Zehr; M Mellon; S Braun; W Litaker; T Steppe; H W Paerl
Journal:  Appl Environ Microbiol       Date:  1995-07       Impact factor: 4.792

3.  Biodiversity of benthic microbial communities in bioturbated coastal sediments is controlled by geochemical microniches.

Authors:  Victoria J Bertics; Wiebke Ziebis
Journal:  ISME J       Date:  2009-05-21       Impact factor: 10.302

4.  Supershrimp: deep bioturbation in the strait of canso, nova scotia.

Authors:  G S Pemberton; M J Risk; D E Buckley
Journal:  Science       Date:  1976-05-21       Impact factor: 47.728

5.  Nitrogen fixation by sulfate-reducing bacteria indicated by nitrogen argon ratios.

Authors:  F D SISLER; C E ZOBELL
Journal:  Science       Date:  1951-05-04       Impact factor: 47.728

6.  Denitrification rates in a marine sediment as measured by the acetylene inhibition technique.

Authors:  J Sørensen
Journal:  Appl Environ Microbiol       Date:  1978-07       Impact factor: 4.792

7.  Bioturbation: impact on the marine nitrogen cycle.

Authors:  Bonnie Laverock; Jack A Gilbert; Karen Tait; A Mark Osborn; Steve Widdicombe
Journal:  Biochem Soc Trans       Date:  2011-01       Impact factor: 5.407

8.  Sulphate reduction and nitrogen fixation rates associated with roots, rhizomes and sediments from Zostera noltii and Spartina maritima meadows.

Authors:  L B Nielsen; K Finster; D T Welsh; A Donelly; R A Herbert; R de Wit; B A Lomstein
Journal:  Environ Microbiol       Date:  2001-01       Impact factor: 5.491

Review 9.  Nitrogen cycling in coastal marine ecosystems.

Authors:  R A Herbert
Journal:  FEMS Microbiol Rev       Date:  1999-10       Impact factor: 16.408

10.  Reversal of the net dinitrogen gas flux in coastal marine sediments.

Authors:  R W Fulweiler; S W Nixon; B A Buckley; S L Granger
Journal:  Nature       Date:  2007-07-12       Impact factor: 49.962

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  4 in total

1.  Profiling gene expression to distinguish the likely active diazotrophs from a sea of genetic potential in marine sediments.

Authors:  S M Brown; B D Jenkins
Journal:  Environ Microbiol       Date:  2014-03-25       Impact factor: 5.491

2.  The effect of bio-irrigation by the polychaete Lanice conchilega on active denitrifiers: Distribution, diversity and composition of nosZ gene.

Authors:  Maryam Yazdani Foshtomi; Frederik Leliaert; Sofie Derycke; Anne Willems; Magda Vincx; Jan Vanaverbeke
Journal:  PLoS One       Date:  2018-02-06       Impact factor: 3.240

3.  The sensitivity of marine N(2) fixation to dissolved inorganic nitrogen.

Authors:  Angela N Knapp
Journal:  Front Microbiol       Date:  2012-10-19       Impact factor: 5.640

Review 4.  Benthic N2 fixation in coral reefs and the potential effects of human-induced environmental change.

Authors:  Ulisse Cardini; Vanessa N Bednarz; Rachel A Foster; Christian Wild
Journal:  Ecol Evol       Date:  2014-03-31       Impact factor: 2.912

  4 in total

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