Literature DB >> 22443686

Calculation of total free energy yield as an alternative approach for predicting the importance of potential chemolithotrophic reactions in geothermal springs.

Jeremy A Dodsworth1, Austin I McDonald, Brian P Hedlund.   

Abstract

To inform hypotheses regarding the relative importance of chemolithotrophic metabolisms in geothermal environments, we calculated free energy yields of 26 chemical reactions potentially supporting chemolithotrophy in two US Great Basin hot springs, taking into account the effects of changing reactant and product activities on the Gibbs free energy as each reaction progressed. Results ranged from 1.2 × 10(-5) to 3.6 J kg(-1) spring water, or 3.7 × 10(-5) to 11.5 J s(-1) based on measured flow rates, with aerobic oxidation of CH(4) or NH4 + giving the highest average yields. Energy yields calculated without constraining pH were similar to those at constant pH except for reactions where H(+) was consumed, which often had significantly lower yields when pH was unconstrained. In contrast to the commonly used normalization of reaction chemical affinities per mole of electrons transferred, reaction energy yields for a given oxidant varied by several orders of magnitude and were more sensitive to differences in the activities of products and reactants. The high energy yield of aerobic ammonia oxidation is consistent with previous observations of significant ammonia oxidation rates and abundant ammonia-oxidizing archaea in sediments of these springs. This approach offers an additional lens through which to view the thermodynamic landscape of geothermal springs.
© 2012 Federation of European Microbiological Societies. Published by Blackwell Publishing Ltd. All rights reserved.

Entities:  

Mesh:

Substances:

Year:  2012        PMID: 22443686     DOI: 10.1111/j.1574-6941.2012.01369.x

Source DB:  PubMed          Journal:  FEMS Microbiol Ecol        ISSN: 0168-6496            Impact factor:   4.194


  9 in total

Review 1.  Diversity, physiology, and niche differentiation of ammonia-oxidizing archaea.

Authors:  Roland Hatzenpichler
Journal:  Appl Environ Microbiol       Date:  2012-08-24       Impact factor: 4.792

2.  Community microrespirometry and molecular analyses reveal a diverse energy economy in Great Boiling Spring and Sandy's Spring West in the U.S. Great Basin.

Authors:  Caitlin N Murphy; Jeremy A Dodsworth; Aaron B Babbitt; Brian P Hedlund
Journal:  Appl Environ Microbiol       Date:  2013-03-08       Impact factor: 4.792

3.  Nitrogen and Oxygen Isotope Effects of Ammonia Oxidation by Thermophilic Thaumarchaeota from a Geothermal Water Stream.

Authors:  Manabu Nishizawa; Sanae Sakai; Uta Konno; Nozomi Nakahara; Yoshihiro Takaki; Yumi Saito; Hiroyuki Imachi; Eiji Tasumi; Akiko Makabe; Keisuke Koba; Ken Takai
Journal:  Appl Environ Microbiol       Date:  2016-07-15       Impact factor: 4.792

4.  Lateral gene transfer of family A DNA polymerases between thermophilic viruses, aquificae, and apicomplexa.

Authors:  Thomas W Schoenfeld; Senthil K Murugapiran; Jeremy A Dodsworth; Sally Floyd; Michael Lodes; David A Mead; Brian P Hedlund
Journal:  Mol Biol Evol       Date:  2013-04-22       Impact factor: 16.240

5.  Extremophilic nitrite-oxidizing Chloroflexi from Yellowstone hot springs.

Authors:  Eva Spieck; Michael Spohn; Katja Wendt; Eberhard Bock; Jessup Shively; Jeroen Frank; Daniela Indenbirken; Malik Alawi; Sebastian Lücker; Jennifer Hüpeden
Journal:  ISME J       Date:  2019-10-17       Impact factor: 10.302

6.  Enrichment and genome sequence of the group I.1a ammonia-oxidizing Archaeon "Ca. Nitrosotenuis uzonensis" representing a clade globally distributed in thermal habitats.

Authors:  Elena V Lebedeva; Roland Hatzenpichler; Eric Pelletier; Nathalie Schuster; Sandra Hauzmayer; Aleksandr Bulaev; Nadezhda V Grigor'eva; Alexander Galushko; Markus Schmid; Marton Palatinszky; Denis Le Paslier; Holger Daims; Michael Wagner
Journal:  PLoS One       Date:  2013-11-20       Impact factor: 3.240

7.  Genomic Insights of "Candidatus Nitrosocaldaceae" Based on Nine New Metagenome-Assembled Genomes, Including "Candidatus Nitrosothermus" Gen Nov. and Two New Species of "Candidatus Nitrosocaldus".

Authors:  Zhen-Hao Luo; Manik Prabhu Narsing Rao; Hao Chen; Zheng-Shuang Hua; Qi Li; Brian P Hedlund; Zhou-Yan Dong; Bing-Bing Liu; Shu-Xian Guo; Wen-Sheng Shu; Wen-Jun Li
Journal:  Front Microbiol       Date:  2021-01-08       Impact factor: 5.640

Review 8.  Understanding Interaction Patterns within Deep-Sea Microbial Communities and Their Potential Applications.

Authors:  Muhammad Zohaib Nawaz; Raghul Subin Sasidharan; Huda Ahmed Alghamdi; Hongyue Dang
Journal:  Mar Drugs       Date:  2022-01-28       Impact factor: 5.118

Review 9.  Ecological Energetic Perspectives on Responses of Nitrogen-Transforming Chemolithoautotrophic Microbiota to Changes in the Marine Environment.

Authors:  Hongyue Dang; Chen-Tung A Chen
Journal:  Front Microbiol       Date:  2017-07-14       Impact factor: 5.640

  9 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.