Literature DB >> 22443278

DNA-based analysis of regurgitates: a noninvasive approach to examine the diet of invertebrate consumers.

Thomas Waldner1, Michael Traugott.   

Abstract

DNA-based gut content analysis has become an important tool for unravelling feeding interactions in invertebrate communities under natural conditions. It usually implies killing of the consumer and extracting the DNA from its food, using either the whole animal or its dissected gut. This post-mortem approach, however, is not suitable for investigating the diet of rare or protected species and also prohibits tracking individual dietary preferences as each consumer can provide trophic information only once. Moreover, removing large numbers of consumers from a habitat for analysis might critically change population densities and affect species interactions. Here, we present DNA-based analysis of invertebrate regurgitates, a novel approach to overcome these limitations. Conducting feeding experiments where adult Poecilus cupreus (Coleoptera: Carabidae) were fed with larvae of Amphimallon solstitiale (Coleoptera: Scarabaeidae), we show that detection success in regurgitates compared to samples prepared from whole beetles was similar or significantly enhanced for small/medium and large prey DNA fragments, respectively. Prey DNA detection success remained high in regurgitates stored in ethanol for 21 months at room temperature prior to DNA extraction. We conclude that in those invertebrates where regurgitates can be obtained, examination of food DNA in regurgitates offers many advantages over conventional post-mortem gut content analysis.
© 2012 Blackwell Publishing Ltd.

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Year:  2012        PMID: 22443278     DOI: 10.1111/j.1755-0998.2012.03135.x

Source DB:  PubMed          Journal:  Mol Ecol Resour        ISSN: 1755-098X            Impact factor:   7.090


  11 in total

1.  The effect of plant identity and the level of plant decay on molecular gut content analysis in a herbivorous soil insect.

Authors:  Corinna Wallinger; Karin Staudacher; Nikolaus Schallhart; Eva Peter; Philipp Dresch; Anita Juen; Michael Traugott
Journal:  Mol Ecol Resour       Date:  2012-11-20       Impact factor: 7.090

2.  Sparing spiders: faeces as a non-invasive source of DNA.

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Journal:  Front Zool       Date:  2015-01-28       Impact factor: 3.172

3.  Trophic and Non-Trophic Interactions in a Biodiversity Experiment Assessed by Next-Generation Sequencing.

Authors:  Julia Tiede; Bernd Wemheuer; Michael Traugott; Rolf Daniel; Teja Tscharntke; Anne Ebeling; Christoph Scherber
Journal:  PLoS One       Date:  2016-02-09       Impact factor: 3.240

4.  Molecular gut content analysis of different spider body parts.

Authors:  Nuria Macías-Hernández; Kacie Athey; Vanina Tonzo; Owen S Wangensteen; Miquel Arnedo; James D Harwood
Journal:  PLoS One       Date:  2018-05-30       Impact factor: 3.240

5.  DNA Metabarcoding as a Tool for Disentangling Food Webs in Agroecosystems.

Authors:  Ahmadou Sow; Julien Haran; Laure Benoit; Maxime Galan; Thierry Brévault
Journal:  Insects       Date:  2020-05-11       Impact factor: 2.769

6.  The effect of plant identity and mixed feeding on the detection of seed DNA in regurgitates of carabid beetles.

Authors:  Daniela Sint; Yasemin Guenay; Rebecca Mayer; Michael Traugott; Corinna Wallinger
Journal:  Ecol Evol       Date:  2018-10-25       Impact factor: 2.912

7.  Resolving the predator first paradox: Arthropod predator food webs in pioneer sites of glacier forelands.

Authors:  Daniela Sint; Ruediger Kaufmann; Rebecca Mayer; Michael Traugott
Journal:  Mol Ecol       Date:  2018-09-07       Impact factor: 6.185

Review 8.  Analyzing spatial patterns linked to the ecology of herbivores and their natural enemies in the soil.

Authors:  R Campos-Herrera; J G Ali; B M Diaz; L W Duncan
Journal:  Front Plant Sci       Date:  2013-09-30       Impact factor: 5.753

9.  How generalist herbivores exploit belowground plant diversity in temperate grasslands.

Authors:  Corinna Wallinger; Karin Staudacher; Nikolaus Schallhart; Evi Mitterrutzner; Eva-Maria Steiner; Anita Juen; Michael Traugott
Journal:  Mol Ecol       Date:  2013-12-05       Impact factor: 6.185

10.  Evaluation of an automated protocol for efficient and reliable DNA extraction of dietary samples.

Authors:  Corinna Wallinger; Karin Staudacher; Daniela Sint; Bettina Thalinger; Johannes Oehm; Anita Juen; Michael Traugott
Journal:  Ecol Evol       Date:  2017-07-07       Impact factor: 2.912

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