Literature DB >> 22442240

Crystallization and preliminary X-ray analysis of the subclass B3 metallo-β-lactamase SMB-1 that confers carbapenem resistance.

Jun-ichi Wachino1, Yoshihiro Yamaguchi, Shigetarou Mori, Yuriko Yamagata, Yoshichika Arakawa, Keigo Shibayama.   

Abstract

The carbapenem-hydrolyzing subclass B3 metallo-β-lactamase SMB-1 was expressed in Escherichia coli and purified. Diffraction data were collected from two types of SMB-1 crystals that were obtained under different conditions. One crystal (SMB-1a) belonged to the trigonal space group P3(1) with unit-cell parameters a = b = 67.83, c = 48.67 Å, while the other crystal (SMB-1b) also belonged to space group P3(1) but with unit-cell parameters a = b = 67.25, c = 46.83 Å. Both crystals contained one molecule per asymmetric unit. Initial phases were determined by molecular replacement; further refinement and model building are in progress.
© 2012 International Union of Crystallography

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Year:  2012        PMID: 22442240      PMCID: PMC3310548          DOI: 10.1107/S1744309112004691

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  16 in total

Review 1.  Class B beta-lactamases: the importance of being metallic.

Authors:  J A Cricco; A J Vila
Journal:  Curr Pharm Des       Date:  1999-11       Impact factor: 3.116

2.  Update of the standard numbering scheme for class B beta-lactamases.

Authors:  Gianpiero Garau; Isabel García-Sáez; Carine Bebrone; Christine Anne; Paola Mercuri; Moreno Galleni; Jean-Marie Frère; Otto Dideberg
Journal:  Antimicrob Agents Chemother       Date:  2004-07       Impact factor: 5.191

3.  Probing, inhibition, and crystallographic characterization of metallo-beta-lactamase (IMP-1) with fluorescent agents containing dansyl and thiol groups.

Authors:  Hiromasa Kurosaki; Yoshihiro Yamaguchi; Hisami Yasuzawa; Wanchun Jin; Yuriko Yamagata; Yoshichika Arakawa
Journal:  ChemMedChem       Date:  2006-09       Impact factor: 3.466

4.  Postgenomic scan of metallo-beta-lactamase homologues in rhizobacteria: identification and characterization of BJP-1, a subclass B3 ortholog from Bradyrhizobium japonicum.

Authors:  Magdalena Stoczko; Jean-Marie Frère; Gian Maria Rossolini; Jean-Denis Docquier
Journal:  Antimicrob Agents Chemother       Date:  2006-06       Impact factor: 5.191

5.  Structural insights into the design of inhibitors for the L1 metallo-beta-lactamase from Stenotrophomonas maltophilia.

Authors:  L Nauton; R Kahn; G Garau; J F Hernandez; O Dideberg
Journal:  J Mol Biol       Date:  2007-10-22       Impact factor: 5.469

6.  The 1.5-A structure of Chryseobacterium meningosepticum zinc beta-lactamase in complex with the inhibitor, D-captopril.

Authors:  Isabel García-Saez; Julie Hopkins; Cyril Papamicael; Nicola Franceschini; Gianfranco Amicosante; Gian Maria Rossolini; Moreno Galleni; Jean-Marie Frère; Otto Dideberg
Journal:  J Biol Chem       Date:  2003-04-08       Impact factor: 5.157

7.  Antibiotic sensitization using biphenyl tetrazoles as potent inhibitors of Bacteroides fragilis metallo-beta-lactamase.

Authors:  J H Toney; P M Fitzgerald; N Grover-Sharma; S H Olson; W J May; J G Sundelof; D E Vanderwall; K A Cleary; S K Grant; J K Wu; J W Kozarich; D L Pompliano; G G Hammond
Journal:  Chem Biol       Date:  1998-04

8.  SMB-1, a novel subclass B3 metallo-beta-lactamase, associated with ISCR1 and a class 1 integron, from a carbapenem-resistant Serratia marcescens clinical isolate.

Authors:  Jun-ichi Wachino; Hiroyuki Yoshida; Kunikazu Yamane; Satowa Suzuki; Mari Matsui; Takuya Yamagishi; Atsuko Tsutsui; Toshifumi Konda; Keigo Shibayama; Yoshichika Arakawa
Journal:  Antimicrob Agents Chemother       Date:  2011-08-29       Impact factor: 5.191

9.  The crystal structure of the L1 metallo-beta-lactamase from Stenotrophomonas maltophilia at 1.7 A resolution.

Authors:  J H Ullah; T R Walsh; I A Taylor; D C Emery; C S Verma; S J Gamblin; J Spencer
Journal:  J Mol Biol       Date:  1998-11-20       Impact factor: 5.469

10.  Crystallographic investigation of the inhibition mode of a VIM-2 metallo-beta-lactamase from Pseudomonas aeruginosa by a mercaptocarboxylate inhibitor.

Authors:  Yoshihiro Yamaguchi; Wanchun Jin; Kazuyo Matsunaga; Shinnji Ikemizu; Yuriko Yamagata; Jun-ichi Wachino; Naohiro Shibata; Yoshichika Arakawa; Hiromasa Kurosaki
Journal:  J Med Chem       Date:  2007-12-06       Impact factor: 7.446

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  3 in total

1.  Structural Insights into Recognition of Hydrolyzed Carbapenems and Inhibitors by Subclass B3 Metallo-β-Lactamase SMB-1.

Authors:  Jun-Ichi Wachino; Yoshihiro Yamaguchi; Shigetarou Mori; Wanchun Jin; Kouji Kimura; Hiromasa Kurosaki; Yoshichika Arakawa
Journal:  Antimicrob Agents Chemother       Date:  2016-06-20       Impact factor: 5.191

2.  Structural insights into the subclass B3 metallo-β-lactamase SMB-1 and the mode of inhibition by the common metallo-β-lactamase inhibitor mercaptoacetate.

Authors:  Jun-Ichi Wachino; Yoshihiro Yamaguchi; Shigetarou Mori; Hiromasa Kurosaki; Yoshichika Arakawa; Keigo Shibayama
Journal:  Antimicrob Agents Chemother       Date:  2012-10-15       Impact factor: 5.191

3.  Insights into an evolutionary strategy leading to antibiotic resistance.

Authors:  Chun-Feng D Hou; Jian-Wei Liu; Charles Collyer; Nataša Mitić; Marcelo Monteiro Pedroso; Gerhard Schenk; David L Ollis
Journal:  Sci Rep       Date:  2017-01-11       Impact factor: 4.379

  3 in total

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