Literature DB >> 22442235

Crystallization and preliminary X-ray analysis of a hyperthermophilic endoglucanase from Pyrococcus furiosus.

Misumi Kataoka1, Han-Woo Kim, Kazuhiko Ishikawa.   

Abstract

The hyperthermophilic glycoside hydrolase family 12 endocellulase from the archaeon Pyrococcus furiosus (EGPf) catalyzes the hydrolytic cleavage of the β-1,4-glucosidic linkage in β-glucans in biomass. EGPf (Gene ID PF0854; EC 3.2.1.4) contains a signal sequence and proline- and hydroxyl-rich regions at the N-terminus. Truncated EGPf (EGPfΔN30) without the proline- and hydroxyl-rich regions at the N-terminus was prepared and subjected to crystallization experiments. Crystals were obtained using the hanging-drop vapour-diffusion method at 303 K. An X-ray diffraction data set was collected to 1.07 Å resolution at 100 K. The crystal belonged to space group P2(1)2(1)2, with unit-cell parameters a = 58.01, b = 118.67, c = 46.76 Å. The presence of one molecule of enzyme per asymmetric unit gives a crystal volume per protein mass (V(M)) of 2.63 Å(3) Da(-1) and a solvent content of 53.3%(v/v).
© 2012 International Union of Crystallography

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Year:  2012        PMID: 22442235      PMCID: PMC3310543          DOI: 10.1107/S1744309112003740

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  6 in total

1.  Structure of hyperthermophilic endocellulase from Pyrococcus horikoshii.

Authors:  Han-Woo Kim; Kazuhiko Ishikawa
Journal:  Proteins       Date:  2010-02-01

2.  An endoglucanase, EglA, from the hyperthermophilic archaeon Pyrococcus furiosus hydrolyzes beta-1,4 bonds in mixed-linkage (1-->3),(1-->4)-beta-D-glucans and cellulose.

Authors:  M W Bauer; L E Driskill; W Callen; M A Snead; E J Mathur; R M Kelly
Journal:  J Bacteriol       Date:  1999-01       Impact factor: 3.490

3.  Functional analysis of hyperthermophilic endocellulase from Pyrococcus horikoshii by crystallographic snapshots.

Authors:  Han-Woo Kim; Kazuhiko Ishikawa
Journal:  Biochem J       Date:  2011-07-15       Impact factor: 3.857

4.  Calculation of protein extinction coefficients from amino acid sequence data.

Authors:  S C Gill; P H von Hippel
Journal:  Anal Biochem       Date:  1989-11-01       Impact factor: 3.365

5.  Solvent content of protein crystals.

Authors:  B W Matthews
Journal:  J Mol Biol       Date:  1968-04-28       Impact factor: 5.469

6.  Analysis of the function of a hyperthermophilic endoglucanase from Pyrococcus horikoshii that hydrolyzes crystalline cellulose.

Authors:  Yasuhiro Kashima; Kazushige Mori; Harumi Fukada; Kazuhiko Ishikawa
Journal:  Extremophiles       Date:  2004-09-16       Impact factor: 2.395

  6 in total
  1 in total

1.  A new crystal form of a hyperthermophilic endocellulase.

Authors:  Misumi Kataoka; Kazuhiko Ishikawa
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2014-06-18       Impact factor: 1.056

  1 in total

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