Literature DB >> 22442221

Purification, crystallization and preliminary X-ray analysis of PPD6, a PsbP-domain protein from Arabidopsis thaliana.

Michael Hall1, Thomas Kieselbach, Uwe H Sauer, Wolfgang P Schröder.   

Abstract

The PsbP protein is an extrinsic component of photosystem II that together with PsbO and PsbQ forms the thylakoid lumenal part of the oxygen-evolving complex in higher plants. In addition to PsbP, the thylakoid lumen contains two PsbP-like proteins (PPLs) and six PsbP-domain proteins (PPDs). While the functions of the PsbP-like proteins PPL1 and PPL2 are currently under investigation, the function of the PsbP-domain proteins still remains completely unknown. PPD6 is unique among the PsbP family of proteins in that it contains a conserved disulfide bond which can be reduced in vitro by thioredoxin. The crystal structure determination of the PPD6 protein has been initiated in order to elucidate its function and to gain deeper insights into redox-regulation pathways in the thylakoid lumen. PPD6 has been expressed, purified and crystallized and preliminary X-ray diffraction data have been collected. The crystals belonged to space group P2(1), with unit-cell parameters a = 47.0, b = 64.3, c = 62.0 Å, β = 94.2°, and diffracted to a maximum d-spacing of 2.1 Å.
© 2012 International Union of Crystallography

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Year:  2012        PMID: 22442221      PMCID: PMC3310529          DOI: 10.1107/S1744309111042023

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  18 in total

1.  Central functions of the lumenal and peripheral thylakoid proteome of Arabidopsis determined by experimentation and genome-wide prediction.

Authors:  Jean-Benoît Peltier; Olof Emanuelsson; Dário E Kalume; Jimmy Ytterberg; Giulia Friso; Andrea Rudella; David A Liberles; Linda Söderberg; Peter Roepstorff; Gunnar von Heijne; Klaas J van Wijk
Journal:  Plant Cell       Date:  2002-01       Impact factor: 11.277

2.  Matthews coefficient probabilities: Improved estimates for unit cell contents of proteins, DNA, and protein-nucleic acid complex crystals.

Authors:  Katherine A Kantardjieff; Bernhard Rupp
Journal:  Protein Sci       Date:  2003-09       Impact factor: 6.725

3.  Crystal structure of the PsbP protein of photosystem II from Nicotiana tabacum.

Authors:  Kentaro Ifuku; Toru Nakatsu; Hiroaki Kato; Fumihiko Sato
Journal:  EMBO Rep       Date:  2004-03-12       Impact factor: 8.807

4.  A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding.

Authors:  M M Bradford
Journal:  Anal Biochem       Date:  1976-05-07       Impact factor: 3.365

Review 5.  The extrinsic polypeptides of Photosystem II.

Authors:  A Seidler
Journal:  Biochim Biophys Acta       Date:  1996-11-12

6.  Proteome map of the chloroplast lumen of Arabidopsis thaliana.

Authors:  Maria Schubert; Ulrika A Petersson; Brian J Haas; Christiane Funk; Wolfgang P Schröder; Thomas Kieselbach
Journal:  J Biol Chem       Date:  2001-11-21       Impact factor: 5.157

7.  Solvent content of protein crystals.

Authors:  B W Matthews
Journal:  J Mol Biol       Date:  1968-04-28       Impact factor: 5.469

8.  A peroxidase homologue and novel plastocyanin located by proteomics to the Arabidopsis chloroplast thylakoid lumen.

Authors:  T Kieselbach; M Bystedt; P Hynds; C Robinson; W P Schröder
Journal:  FEBS Lett       Date:  2000-09-01       Impact factor: 4.124

Review 9.  Scaling and assessment of data quality.

Authors:  Philip Evans
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2005-12-14

10.  Overview of the CCP4 suite and current developments.

Authors:  Martyn D Winn; Charles C Ballard; Kevin D Cowtan; Eleanor J Dodson; Paul Emsley; Phil R Evans; Ronan M Keegan; Eugene B Krissinel; Andrew G W Leslie; Airlie McCoy; Stuart J McNicholas; Garib N Murshudov; Navraj S Pannu; Elizabeth A Potterton; Harold R Powell; Randy J Read; Alexei Vagin; Keith S Wilson
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2011-03-18
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  4 in total

Review 1.  The PsbP family of proteins.

Authors:  Terry M Bricker; Johnna L Roose; Pengpeng Zhang; Laurie K Frankel
Journal:  Photosynth Res       Date:  2013-04-07       Impact factor: 3.573

2.  The Antarctic Psychrophile Chlamydomonas sp. UWO 241 Preferentially Phosphorylates a Photosystem I-Cytochrome b6/f Supercomplex.

Authors:  Beth Szyszka-Mroz; Paula Pittock; Alexander G Ivanov; Gilles Lajoie; Norman P A Hüner
Journal:  Plant Physiol       Date:  2015-07-13       Impact factor: 8.340

3.  Crystals on the cover 2013.

Authors:  Howard Einspahr; Manfred S Weiss
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2012-12-31

Review 4.  Photosystem II Extrinsic Proteins and Their Putative Role in Abiotic Stress Tolerance in Higher Plants.

Authors:  Shina Sasi; Jelli Venkatesh; Rawya Fatohllah Daneshi; Mayank Anand Gururani
Journal:  Plants (Basel)       Date:  2018-11-14
  4 in total

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