Literature DB >> 22442193

Is the general time-reversible model bad for molecular phylogenetics?

Jeremy G Sumner1, Peter D Jarvis, Jesús Fernández-Sánchez, Bodie T Kaine, Michael D Woodhams, Barbara R Holland.   

Abstract

Mesh：

Year:  2012        PMID： 22442193     DOI： 10.1093/sysbio/sys042

Source DB:  PubMed          Journal:  Syst Biol        ISSN： 1063-5157            Impact factor:   15.683


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  12 in total

1.  Matrix group structure and Markov invariants in the strand symmetric phylogenetic substitution model.

Authors:  Peter D Jarvis; Jeremy G Sumner
Journal:  J Math Biol       Date:  2015-12-11       Impact factor: 2.259

2.  Lie Markov models with purine/pyrimidine symmetry.

Authors:  Jesús Fernández-Sánchez; Jeremy G Sumner; Peter D Jarvis; Michael D Woodhams
Journal:  J Math Biol       Date:  2014-04-11       Impact factor: 2.259

3.  A New Hierarchy of Phylogenetic Models Consistent with Heterogeneous Substitution Rates.

Authors:  Michael D Woodhams; Jesús Fernández-Sánchez; Jeremy G Sumner
Journal:  Syst Biol       Date:  2015-04-08       Impact factor: 15.683

4.  Genotyping-by-sequencing provides the discriminating power to investigate the subspecies of Daucus carota (Apiaceae).

Authors:  Carlos I Arbizu; Shelby L Ellison; Douglas Senalik; Philipp W Simon; David M Spooner
Journal:  BMC Evol Biol       Date:  2016-10-28       Impact factor: 3.260

5.  Mixed Infections of Four Viruses, the Incidence and Phylogenetic Relationships of Sweet Potato Chlorotic Fleck Virus (Betaflexiviridae) Isolates in Wild Species and Sweetpotatoes in Uganda and Evidence of Distinct Isolates in East Africa.

Authors:  Arthur K Tugume; Settumba B Mukasa; Jari P T Valkonen
Journal:  PLoS One       Date:  2016-12-22       Impact factor: 3.240

6.  On the group theoretical background of assigning stepwise mutations onto phylogenies.

Authors:  Mareike Fischer; Steffen Klaere; Minh Anh Thi Nguyen; Arndt von Haeseler
Journal:  Algorithms Mol Biol       Date:  2012-12-15       Impact factor: 1.405

7.  A branch-heterogeneous model of protein evolution for efficient inference of ancestral sequences.

Authors:  M Groussin; B Boussau; M Gouy
Journal:  Syst Biol       Date:  2013-03-07       Impact factor: 15.683

8.  Trends in substitution models of molecular evolution.

Authors:  Miguel Arenas
Journal:  Front Genet       Date:  2015-10-26       Impact factor: 4.599

9.  Maximize Resolution or Minimize Error? Using Genotyping-By-Sequencing to Investigate the Recent Diversification of Helianthemum (Cistaceae).

Authors:  Sara Martín-Hernanz; Abelardo Aparicio; Mario Fernández-Mazuecos; Encarnación Rubio; J Alfredo Reyes-Betancort; Arnoldo Santos-Guerra; María Olangua-Corral; Rafael G Albaladejo
Journal:  Front Plant Sci       Date:  2019-11-11       Impact factor: 5.753

10.  Relative Efficiencies of Simple and Complex Substitution Models in Estimating Divergence Times in Phylogenomics.

Authors:  Qiqing Tao; Jose Barba-Montoya; Louise A Huuki; Mary Kathleen Durnan; Sudhir Kumar
Journal:  Mol Biol Evol       Date:  2020-06-01       Impact factor: 16.240
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