Literature DB >> 22439696

Coupled electron transfer and proton hopping in the final step of CYP19-catalyzed androgen aromatization.

Kakali Sen1, John C Hackett.   

Abstract

Aromatase (CYP19) catalyzes the terminal step in estrogen biosynthesis, which requires three separate oxidation reactions, culminating in an enigmatic aromatization that converts an androgen to an estrogen. A stable ferric peroxo (Fe(3+)O(2)(2-)) intermediate is seen by electron paramagnetic resonance, but its role in this complex reaction remains controversial. Combining molecular dynamics simulation and hybrid quantum mechanics/molecular mechanics, we show that ferric peroxo addition to the 19-aldehyde initiates the reaction. Stepwise cleavage of the C10-C19 and O-O bonds of the peroxohemiacetal extrudes formate and yields Compound II, which in turn desaturates the steroid through successive abstraction of the 1β-hydrogen atom and deprotonation of the 2β-position. Throughout the transformation, a proton is cyclically relayed between D309 and the substrate to stabilize reaction intermediates. This mechanism invokes novel oxygen intermediates and provides a unifying interpretation of past experimental mechanistic studies.
© 2012 American Chemical Society

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Year:  2012        PMID: 22439696      PMCID: PMC3326664          DOI: 10.1021/bi300017p

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  35 in total

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Journal:  Phys Rev Lett       Date:  1996-10-28       Impact factor: 9.161

2.  New AMBER force field parameters of heme iron for cytochrome P450s determined by quantum chemical calculations of simplified models.

Authors:  Akifumi Oda; Noriyuki Yamaotsu; Shuichi Hirono
Journal:  J Comput Chem       Date:  2005-06       Impact factor: 3.376

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Authors:  Ilia G Denisov; Thomas M Makris; Stephen G Sligar; Ilme Schlichting
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4.  A molecular mechanics force field for biologically important sterols.

Authors:  Zoe Cournia; Jeremy C Smith; G Matthias Ullmann
Journal:  J Comput Chem       Date:  2005-10       Impact factor: 3.376

5.  Insights into current limitations of density functional theory.

Authors:  Aron J Cohen; Paula Mori-Sánchez; Weitao Yang
Journal:  Science       Date:  2008-08-08       Impact factor: 47.728

Review 6.  P450 enzymes: their structure, reactivity, and selectivity-modeled by QM/MM calculations.

Authors:  Sason Shaik; Shimrit Cohen; Yong Wang; Hui Chen; Devesh Kumar; Walter Thiel
Journal:  Chem Rev       Date:  2010-02-10       Impact factor: 60.622

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Journal:  Biochemistry       Date:  1969-11       Impact factor: 3.162

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Journal:  Biochem J       Date:  1982-03-01       Impact factor: 3.857

Review 10.  The P450 superfamily: update on new sequences, gene mapping, and recommended nomenclature.

Authors:  D W Nebert; D R Nelson; M J Coon; R W Estabrook; R Feyereisen; Y Fujii-Kuriyama; F J Gonzalez; F P Guengerich; I C Gunsalus; E F Johnson
Journal:  DNA Cell Biol       Date:  1991 Jan-Feb       Impact factor: 3.311

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  11 in total

Review 1.  Recent Progress in the Discovery of Next Generation Inhibitors of Aromatase from the Structure-Function Perspective.

Authors:  Debashis Ghosh; Jessica Lo; Chinaza Egbuta
Journal:  J Med Chem       Date:  2016-01-19       Impact factor: 7.446

Review 2.  Formation and Cleavage of C-C Bonds by Enzymatic Oxidation-Reduction Reactions.

Authors:  F Peter Guengerich; Francis K Yoshimoto
Journal:  Chem Rev       Date:  2018-06-22       Impact factor: 60.622

3.  Ab initio dynamics of the cytochrome P450 hydroxylation reaction.

Authors:  Justin E Elenewski; John C Hackett
Journal:  J Chem Phys       Date:  2015-02-14       Impact factor: 3.488

4.  Biophysical characterization of Aptenodytes forsteri cytochrome P450 aromatase.

Authors:  Francisco Zarate-Perez; Jesús B Velázquez-Fernández; Gareth K Jennings; Lisa S Shock; Charles E Lyons; John C Hackett
Journal:  J Inorg Biochem       Date:  2018-04-07       Impact factor: 4.155

5.  Evidence for an elevated aspartate pK(a) in the active site of human aromatase.

Authors:  Giovanna Di Nardo; Maximilian Breitner; Andrea Bandino; Debashis Ghosh; Gareth K Jennings; John C Hackett; Gianfranco Gilardi
Journal:  J Biol Chem       Date:  2014-11-25       Impact factor: 5.157

6.  Cytochrome P450 compound I in the plane wave pseudopotential framework: GGA electronic and geometric structure of thiolate-ligated iron(IV)-oxo porphyrin.

Authors:  Justin E Elenewski; John C Hackett
Journal:  J Comput Chem       Date:  2013-05-14       Impact factor: 3.376

7.  Transcutaneous electrical acupoint stimulation alleviates the hyperandrogenism of polycystic ovarian syndrome rats by regulating the expression of P450arom and CTGF in the ovaries.

Authors:  Fan Qu; Yi Liang; Jue Zhou; Rui-Jie Ma; Jie Zhou; Fang-Fang Wang; Yan Wu; Jian-Qiao Fang
Journal:  Int J Clin Exp Med       Date:  2015-05-15

8.  Structural basis for the functional roles of critical residues in human cytochrome p450 aromatase.

Authors:  Jessica Lo; Giovanna Di Nardo; Jennifer Griswold; Chinaza Egbuta; Wenhua Jiang; Gianfranco Gilardi; Debashis Ghosh
Journal:  Biochemistry       Date:  2013-08-16       Impact factor: 3.162

9.  Mechanism of 17α,20-Lyase and New Hydroxylation Reactions of Human Cytochrome P450 17A1: 18O LABELING AND OXYGEN SURROGATE EVIDENCE FOR A ROLE OF A PERFERRYL OXYGEN.

Authors:  Francis K Yoshimoto; Eric Gonzalez; Richard J Auchus; F Peter Guengerich
Journal:  J Biol Chem       Date:  2016-06-23       Impact factor: 5.157

10.  Mechanism of the third oxidative step in the conversion of androgens to estrogens by cytochrome P450 19A1 steroid aromatase.

Authors:  Francis K Yoshimoto; F Peter Guengerich
Journal:  J Am Chem Soc       Date:  2014-10-10       Impact factor: 15.419

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