Literature DB >> 2243774

The signal for growth rate control and stringent sensitivity in E. coli is not restricted to a particular sequence motif within the promoter region.

M Zacharias1, H U Göringer, R Wagner.   

Abstract

Hybrid promoter constructs were used to determine the DNA sequence requirements for stringent and growth rate control within a promoter region. The promoters were obtained by fusing complementing sequence regions located upstream and downstream from the GCGC discriminator motif of the growth rate regulated rRNA P1 promoter and a non-regulated tac promoter variant. The activities and the regulatory response of the hybrid promoters were determined in vivo using a promoter test vector system with the chloramphenicol acetyltransferase (CAT) reporter gene. Measurements were made at different growth rates and after starvation for isoleucine to induce the stringent response. Neither the upstream nor the downstream sequence of P1 relative to the GCGC discriminator motif conferred comparable regulatory features when fused to the complementing sequences of the non-regulated mutant tac promoter. A minor response to amino acid deprivation or changes in the growth rate was noted for the hybrid promoter with the rrnB P1 upstream segment and the tac downstream element, pointing to a slightly different importance of the two sequence elements for regulation. The parallel effects for stringent as well as growth rate regulation of the hybrid promoters supports the view of a common mechanism for both types of control. However, none of the promoter sequence elements on its own was able to restore the complete regulatory behaviour of their 'parent' promoters.

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Year:  1990        PMID: 2243774      PMCID: PMC332491          DOI: 10.1093/nar/18.21.6271

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  25 in total

1.  DNA determinants of rRNA synthesis in E. coli: growth rate dependent regulation, feedback inhibition, upstream activation, antitermination.

Authors:  R L Gourse; H A de Boer; M Nomura
Journal:  Cell       Date:  1986-01-17       Impact factor: 41.582

2.  Stringent and growth control of rRNA synthesis in Escherichia coli are both mediated by ppGpp.

Authors:  E Baracchini; H Bremer
Journal:  J Biol Chem       Date:  1988-02-25       Impact factor: 5.157

3.  Basal ppGpp level adjustment shown by new spoT mutants affect steady state growth rates and rrnA ribosomal promoter regulation in Escherichia coli.

Authors:  E Sarubbi; K E Rudd; M Cashel
Journal:  Mol Gen Genet       Date:  1988-08

4.  Alteration of the growth-rate-dependent regulation of Escherichia coli tyrT expression by promoter mutations.

Authors:  A A Travers; A I Lamond; J R Weeks
Journal:  J Mol Biol       Date:  1986-05-05       Impact factor: 5.469

5.  Promoter sequence for stringent control of bacterial ribonucleic acid synthesis.

Authors:  A A Travers
Journal:  J Bacteriol       Date:  1980-02       Impact factor: 3.490

6.  Measurement of cat expression from growth-rate-regulated promoters employing beta-lactamase activity as an indicator of plasmid copy number.

Authors:  R A Klotsky; I Schwartz
Journal:  Gene       Date:  1987       Impact factor: 3.688

7.  Genetically separable functional elements mediate the optimal expression and stringent regulation of a bacterial tRNA gene.

Authors:  A I Lamond; A A Travers
Journal:  Cell       Date:  1985-02       Impact factor: 41.582

8.  Bacillus subtilis rRNA promoters are growth rate regulated in Escherichia coli.

Authors:  H G Deneer; G B Spiegelman
Journal:  J Bacteriol       Date:  1987-03       Impact factor: 3.490

9.  Functional characterization of a putative internal promoter sequence between the 16S and the 23S RNA genes within the Escherichia coli rrnB operon.

Authors:  M Zacharias; R Wagner
Journal:  Mol Microbiol       Date:  1989-03       Impact factor: 3.501

10.  Regulation of the expression of the tufB operon: DNA sequences directly involved in the stringent control.

Authors:  J Mizushima-Sugano; Y Kaziro
Journal:  EMBO J       Date:  1985-04       Impact factor: 11.598

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  4 in total

1.  In vivo regulatory responses of four Escherichia coli operons which encode leucyl-tRNAs.

Authors:  K B Rowley; R M Elford; I Roberts; W M Holmes
Journal:  J Bacteriol       Date:  1993-03       Impact factor: 3.490

Review 2.  The regulation of ribosomal RNA synthesis and bacterial cell growth.

Authors:  R Wagner
Journal:  Arch Microbiol       Date:  1994       Impact factor: 2.552

3.  Identification of cis-acting regulatory regions upstream of the rRNA operons of Rhodobacter sphaeroides.

Authors:  S C Dryden; S Kaplan
Journal:  J Bacteriol       Date:  1993-10       Impact factor: 3.490

4.  The E. coli anti-sigma factor Rsd: studies on the specificity and regulation of its expression.

Authors:  Nina Hofmann; Reinhild Wurm; Rolf Wagner
Journal:  PLoS One       Date:  2011-05-06       Impact factor: 3.240

  4 in total

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