Literature DB >> 22435811

Deciphering how the chromatin factor RCC1 recognizes the nucleosome: the importance of individuals in the scientific discovery process.

Song Tan1.   

Abstract

The nucleosome repeating unit of chromatin is the target of chromatin enzymes and factors that regulate gene activity in a eukaryotic cell. How the nucleosome is recognized by chromatin enzymes and factors is poorly understood, even though such interaction is fundamental to gene regulation and chromatin biology. My laboratory recently determined the structural basis for how the RCC1 (regulator of chromosome condensation 1) chromatin factor binds to the nucleosome, including the first atomic crystal structure of a chromatin protein complexed with the nucleosome core particle. I describe here how we developed and investigated structural models for RCC1 binding to the nucleosome using biochemical methods and how we crystallized the 300 kDa complex of RCC1 with the nucleosome core particle. This article highlights the contributions made by key laboratory members and explains our thinking and rationale during the discovery process.

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Year:  2012        PMID: 22435811      PMCID: PMC3578225          DOI: 10.1042/BST20110734

Source DB:  PubMed          Journal:  Biochem Soc Trans        ISSN: 0300-5127            Impact factor:   5.407


  21 in total

1.  Screening orthologs as an important variable in crystallization: preliminary X-ray diffraction studies of the tRNA-modifying enzyme S-adenosyl-methionine:tRNA ribosyl transferase/isomerase.

Authors:  C Grimm; G Klebe; R Ficner; K Reuter
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2000-04

2.  The Saccharomyces cerevisiae Piccolo NuA4 histone acetyltransferase complex requires the Enhancer of Polycomb A domain and chromodomain to acetylate nucleosomes.

Authors:  William Selleck; Israël Fortin; Decha Sermwittayawong; Jacques Côté; Song Tan
Journal:  Mol Cell Biol       Date:  2005-07       Impact factor: 4.272

3.  Structural and molecular characterization of a preferred protein interaction surface on G protein beta gamma subunits.

Authors:  Tara L Davis; Tabetha M Bonacci; Stephen R Sprang; Alan V Smrcka
Journal:  Biochemistry       Date:  2005-08-09       Impact factor: 3.162

4.  The 1.7 A crystal structure of the regulator of chromosome condensation (RCC1) reveals a seven-bladed propeller.

Authors:  L Renault; N Nassar; I Vetter; J Becker; C Klebe; M Roth; A Wittinghofer
Journal:  Nature       Date:  1998-03-05       Impact factor: 49.962

5.  Crystal structure of the nucleosome core particle at 2.8 A resolution.

Authors:  K Luger; A W Mäder; R K Richmond; D F Sargent; T J Richmond
Journal:  Nature       Date:  1997-09-18       Impact factor: 49.962

6.  Chromatin docking and exchange activity enhancement of RCC1 by histones H2A and H2B.

Authors:  M E Nemergut; C A Mizzen; T Stukenberg; C D Allis; I G Macara
Journal:  Science       Date:  2001-05-25       Impact factor: 47.728

7.  Structural basis for guanine nucleotide exchange on Ran by the regulator of chromosome condensation (RCC1).

Authors:  L Renault; J Kuhlmann; A Henkel; A Wittinghofer
Journal:  Cell       Date:  2001-04-20       Impact factor: 41.582

8.  Yeast enhancer of polycomb defines global Esa1-dependent acetylation of chromatin.

Authors:  Alexandre A Boudreault; Dominique Cronier; William Selleck; Nicolas Lacoste; Rhea T Utley; Stéphane Allard; Julie Savard; William S Lane; Song Tan; Jacques Côté
Journal:  Genes Dev       Date:  2003-06-01       Impact factor: 11.361

9.  The nucleosomal surface as a docking station for Kaposi's sarcoma herpesvirus LANA.

Authors:  Andrew J Barbera; Jayanth V Chodaparambil; Brenna Kelley-Clarke; Vladimir Joukov; Johannes C Walter; Karolin Luger; Kenneth M Kaye
Journal:  Science       Date:  2006-02-10       Impact factor: 47.728

10.  Structure of RCC1 chromatin factor bound to the nucleosome core particle.

Authors:  Ravindra D Makde; Joseph R England; Hemant P Yennawar; Song Tan
Journal:  Nature       Date:  2010-08-25       Impact factor: 49.962

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