Literature DB >> 22433073

Metabolomics in agriculture.

K D Nadella1, Soma S Marla, P Ananda Kumar.   

Abstract

Metabolome refers to the complete set of metabolites synthesized through a series of multiple enzymatic steps from various biochemical pathways processing the information encrypted in the plant genome. Knowledge about synthesis and regulation of various plant metabolic substances has improved substantially with availability of Omics data originating from sequencing of plant genomes. Metabolic profiling of crops is increasingly becoming popular in assessing plant phenotypes and genetic diversity. Metabolic compositional changes vividly reflect the changes occurring during plant growth, development, and in response to stress. Hence, study of plant metabolic pathways, the interconnections between them in context of systems biology is increasingly becoming popular in identification of candidate genes. The present article reviews recent developments in analysis of plant metabolomics, available bioinformatics techniques and databases employed for comparative pathway analysis, metabolic QTLs, and their application in plants.

Mesh:

Year:  2012        PMID: 22433073     DOI: 10.1089/omi.2011.0067

Source DB:  PubMed          Journal:  OMICS        ISSN: 1536-2310


  5 in total

Review 1.  Augmentation of crop productivity through interventions of omics technologies in India: challenges and opportunities.

Authors:  Rajesh Kumar Pathak; Mamta Baunthiyal; Dinesh Pandey; Anil Kumar
Journal:  3 Biotech       Date:  2018-10-19       Impact factor: 2.406

2.  BioSM: metabolomics tool for identifying endogenous mammalian biochemical structures in chemical structure space.

Authors:  Mai A Hamdalla; Ion I Mandoiu; Dennis W Hill; Sanguthevar Rajasekaran; David F Grant
Journal:  J Chem Inf Model       Date:  2013-02-27       Impact factor: 4.956

3.  High night temperature strongly impacts TCA cycle, amino acid and polyamine biosynthetic pathways in rice in a sensitivity-dependent manner.

Authors:  Ulrike Glaubitz; Alexander Erban; Joachim Kopka; Dirk K Hincha; Ellen Zuther
Journal:  J Exp Bot       Date:  2015-07-23       Impact factor: 6.992

4.  Season Affects Yield and Metabolic Profiles of Rice (Oryza sativa) under High Night Temperature Stress in the Field.

Authors:  Stephanie Schaarschmidt; Lovely Mae F Lawas; Ulrike Glaubitz; Xia Li; Alexander Erban; Joachim Kopka; S V Krishna Jagadish; Dirk K Hincha; Ellen Zuther
Journal:  Int J Mol Sci       Date:  2020-04-30       Impact factor: 5.923

5.  Secondary Metabolic Profiles of Two Cultivars of Piper nigrum (Black Pepper) Resulting from Infection by Fusarium solani f. sp. piperis.

Authors:  Shirlley F M da Luz; Lydia F Yamaguchi; Massuo J Kato; Oriel F de Lemos; Luciana P Xavier; José Guilherme S Maia; Alessandra de R Ramos; William N Setzer; Joyce Kelly do R da Silva
Journal:  Int J Mol Sci       Date:  2017-12-07       Impact factor: 5.923

  5 in total

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