Literature DB >> 22431383

FCSTrans: an open source software system for FCS file conversion and data transformation.

Yu Qian1,2, Yue Liu3, John Campbell3, Elizabeth Thomson3, Y Megan Kong2, Richard H Scheuermann1,2.   

Abstract

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Year:  2012        PMID： 22431383      PMCID： PMC3932304          DOI： 10.1002/cyto.a.22037

Source DB:  PubMed          Journal:  Cytometry A        ISSN： 1552-4922            Impact factor:   4.355


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  1 in total

1.  Optimizing transformations for automated, high throughput analysis of flow cytometry data.

Authors:  Greg Finak; Juan-Manuel Perez; Andrew Weng; Raphael Gottardo
Journal:  BMC Bioinformatics       Date:  2010-11-04       Impact factor: 3.169
  1 in total
  7 in total

Review 1.  Automated Analysis of Clinical Flow Cytometry Data: A Chronic Lymphocytic Leukemia Illustration.

Authors:  Richard H Scheuermann; Jack Bui; Huan-You Wang; Yu Qian
Journal:  Clin Lab Med       Date:  2017-12       Impact factor: 1.935

2.  DAFi: A directed recursive data filtering and clustering approach for improving and interpreting data clustering identification of cell populations from polychromatic flow cytometry data.

Authors:  Alexandra J Lee; Ivan Chang; Julie G Burel; Cecilia S Lindestam Arlehamn; Aishwarya Mandava; Daniela Weiskopf; Bjoern Peters; Alessandro Sette; Richard H Scheuermann; Yu Qian
Journal:  Cytometry A       Date:  2018-04-17       Impact factor: 4.355

3.  Bidirectional immune tolerance in nonmyeloablative MHC-mismatched BMT for murine β-thalassemia.

Authors:  Shuyu E; Aman Seth; Peter Vogel; Matt Sommers; Taren Ong; Asha B Pillai
Journal:  Blood       Date:  2017-03-28       Impact factor: 22.113

4.  A benchmark for evaluation of algorithms for identification of cellular correlates of clinical outcomes.

Authors:  Nima Aghaeepour; Pratip Chattopadhyay; Maria Chikina; Tom Dhaene; Sofie Van Gassen; Miron Kursa; Bart N Lambrecht; Mehrnoush Malek; G J McLachlan; Yu Qian; Peng Qiu; Yvan Saeys; Rick Stanton; Dong Tong; Celine Vens; Sławomir Walkowiak; Kui Wang; Greg Finak; Raphael Gottardo; Tim Mosmann; Garry P Nolan; Richard H Scheuermann; Ryan R Brinkman
Journal:  Cytometry A       Date:  2015-10-08       Impact factor: 4.355

5.  Mapping cell populations in flow cytometry data for cross-sample comparison using the Friedman-Rafsky test statistic as a distance measure.

Authors:  Chiaowen Hsiao; Mengya Liu; Rick Stanton; Monnie McGee; Yu Qian; Richard H Scheuermann
Journal:  Cytometry A       Date:  2015-08-14       Impact factor: 4.355

6.  Flow cytometry bioinformatics.

Authors:  Kieran O'Neill; Nima Aghaeepour; Josef Spidlen; Ryan Brinkman
Journal:  PLoS Comput Biol       Date:  2013-12-05       Impact factor: 4.475

7.  flowVS: channel-specific variance stabilization in flow cytometry.

Authors:  Ariful Azad; Bartek Rajwa; Alex Pothen
Journal:  BMC Bioinformatics       Date:  2016-07-28       Impact factor: 3.169
  7 in total

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