Literature DB >> 22427721

Pelagostrobilidium neptuni (Montagnes and Taylor, 1994) and Strombidium biarmatum nov. spec. (Ciliophora, Oligotrichea): phylogenetic position inferred from morphology, ontogenesis, and gene sequence data.

Sabine Agatha1, Michaela C Strüder-Kypke, Alfred Beran, Denis H Lynn.   

Abstract

Morphological data from life, protargol impregnation, and scanning electron microscopy were combined with genetic data not only to describe the marine plankton ciliates Pelagostrobilidium neptuni (Montagnes and Taylor, 1994) Petz, Song, and Wilbert, 1995 and Strombidium biarmatum nov. spec., but also to elucidate their phylogenetic relationships. Additionally, the ontogenesis of P. neptuni was studied and the diagnosis of the genus Pelagostrobilidium was improved due to further data from the newly affiliated species P. epacrum (Lynn and Montagnes, 1988) nov. comb. (basionym: Strobilidium epacrum Lynn and Montagnes, 1988). The phylogenetic analysis of the small subunit ribosomal RNA genes matched the morphologic and ontogenetic assigning of P. neptuni to the choreotrichid family Strobilidiidae. The considerable genetic distance of d = 0.074 between P. neptuni and Strobilidium caudatum corroborated the morphological differences and thus the maintenance of the genus Pelagostrobilidium. Strombidium biarmatum nov. spec. is a typical member of the genus, except for the two types of extrusomes ("trichites"): ~12 × 0.5 μm, needle-shaped ones attached anterior to the girdle kinety and ~6 × 0.5 μm, rod-shaped ones at the distal end of the intermembranellar ridges. Its flask-shaped resting cysts have several strong spines. In accordance with the morphologic data, S. biarmatum is placed within the order Oligotrichida by gene sequence analysis. The great genetic distances within the oligotrichids support the diversity found in morphologic and ontogenetic studies.

Entities:  

Year:  2005        PMID: 22427721      PMCID: PMC3303134          DOI: 10.1016/j.ejop.2004.09.005

Source DB:  PubMed          Journal:  Eur J Protistol        ISSN: 0932-4739            Impact factor:   3.020


  21 in total

1.  Phylogenetic relationships within the class Spirotrichea (Ciliophora) inferred from small subunit rRNA gene sequences.

Authors:  D Bernhard; A Stechmann; W Foissner; D Ammermann; M Hehn; M Schlegel
Journal:  Mol Phylogenet Evol       Date:  2001-10       Impact factor: 4.286

2.  Redescription of Strombidium oculatum Gruber 1884 (Ciliophora, Oligotrichia).

Authors:  David J S Montagnes; Chris D Lowe; Alex Poultonb; Per R Jonsson
Journal:  J Eukaryot Microbiol       Date:  2002 Jul-Aug       Impact factor: 3.346

3.  Insights into the diversity of choreotrich and oligotrich ciliates (Class: Spirotrichea) based on genealogical analyses of multiple loci.

Authors:  Oona L O Snoeyenbos-West; Tovah Salcedo; George B McManus; Laura A Katz
Journal:  Int J Syst Evol Microbiol       Date:  2002-09       Impact factor: 2.747

4.  DCSE, an interactive tool for sequence alignment and secondary structure research.

Authors:  P De Rijk; R De Wachter
Journal:  Comput Appl Biosci       Date:  1993-12

5.  Basic light and scanning electron microscopic methods for taxonomic studies of ciliated protozoa.

Authors:  W Foissner
Journal:  Eur J Protistol       Date:  2011-11-02       Impact factor: 3.020

6.  The neighbor-joining method: a new method for reconstructing phylogenetic trees.

Authors:  N Saitou; M Nei
Journal:  Mol Biol Evol       Date:  1987-07       Impact factor: 16.240

7.  The small-subunit ribosomal RNA gene sequences from the hypotrichous ciliates Oxytricha nova and Stylonychia pustulata.

Authors:  H J Elwood; G J Olsen; M L Sogin
Journal:  Mol Biol Evol       Date:  1985-09       Impact factor: 16.240

8.  Defensive extrusive ectosymbionts of Euplotidium (Ciliophora) that contain microtubule-like structures are bacteria related to Verrucomicrobia.

Authors:  G Petroni; S Spring; K H Schleifer; F Verni; G Rosati
Journal:  Proc Natl Acad Sci U S A       Date:  2000-02-15       Impact factor: 11.205

9.  Identifying and distinguishing sibling species in the Tetrahymena pyriformis complex (Ciliophora, Oligohymenophorea) using PCR/RFLP analysis of nuclear ribosomal DNA.

Authors:  C A Jerome; D H Lynn
Journal:  J Eukaryot Microbiol       Date:  1996 Nov-Dec       Impact factor: 3.346

10.  A multidisciplinary approach to describe protists: redescriptions of Novistrombidium testaceum Anigstein 1914 and Strombidium inclinatum Montagnes, Taylor, and Lynn 1990 (Ciliophora, Oligotrichia).

Authors:  Letizia Modeo; Giulio Petroni; Giovanna Rosati; David J S Montagnes
Journal:  J Eukaryot Microbiol       Date:  2003 May-Jun       Impact factor: 3.346

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  11 in total

1.  Diversity of oligotrichia and choreotrichia ciliates in coastal marine sediments and in overlying plankton.

Authors:  Mary Doherty; Maiko Tamura; Jan A C Vriezen; George B McManus; Laura A Katz
Journal:  Appl Environ Microbiol       Date:  2010-04-30       Impact factor: 4.792

2.  Diversity Patterns of Protists Are Highly Affected by Methods Disentangling Biological Variants: A Case Study in Oligotrich (s.l.) Ciliates.

Authors:  Jiahui Xu; Jianlin Han; Hua Su; Changyu Zhu; Zijing Quan; Lei Wu; Zhenzhen Yi
Journal:  Microorganisms       Date:  2022-04-27

3.  Multigene-based analyses of the phylogenetic evolution of oligotrich ciliates, with consideration of the internal transcribed spacer 2 secondary structure of three systematically ambiguous genera.

Authors:  Jiamei Li; Weiwei Liu; Shan Gao; Alan Warren; Weibo Song
Journal:  Eukaryot Cell       Date:  2013-01-11

4.  Some Ultrastructural Features of the Planktonic Freshwater Ciliate Limnostrombidium viride (Alveolata, Ciliophora, Oligotrichida) and Improved Diagnoses of Oligotrich Taxa.

Authors:  Christian F Bardele; Nicole Stockmann; Sabine Agatha
Journal:  Acta Protozool       Date:  2019-01-11       Impact factor: 0.892

5.  Phylogeny of the order Choreotrichida (Ciliophora, Spirotricha, Oligotrichea) as inferred from morphology, ultrastructure, ontogenesis, and SSrRNA gene sequences.

Authors:  Sabine Agatha; Michaela C Strüder-Kypke
Journal:  Eur J Protistol       Date:  2006-12-12       Impact factor: 3.020

6.  Updated hypothesis on the evolution of oligotrichid ciliates (Ciliophora, Spirotricha, Oligotrichida) based on somatic ciliary patterns and ontogenetic data.

Authors:  Sabine Agatha
Journal:  Eur J Protistol       Date:  2010-10-18       Impact factor: 3.020

7.  Global diversity of aloricate Oligotrichea (Protista, Ciliophora, Spirotricha) in marine and brackish sea water.

Authors:  Sabine Agatha
Journal:  PLoS One       Date:  2011-08-10       Impact factor: 3.240

8.  SSU rDNA sequence diversity and seasonally differentiated distribution of nanoplanktonic ciliates in neritic Bohai and Yellow Seas as revealed by T-RFLP.

Authors:  Jun Dong; Fei Shi; Han Li; Xiaoming Zhang; Xiaozhong Hu; Jun Gong
Journal:  PLoS One       Date:  2014-07-15       Impact factor: 3.240

9.  Molecular systematics and ultrastructural characterization of a forgotten species: Chattonidium setense (Ciliophora, Heterotrichea).

Authors:  Letizia Modeo; Giovanna Rosati; Ilaria Andreoli; Simone Gabrielli; Franco Verni; Giulio Petroni
Journal:  Proc Jpn Acad Ser B Phys Biol Sci       Date:  2006-02-12       Impact factor: 3.493

10.  A comparative fine structural and phylogenetic analysis of resting cysts in oligotrich and hypotrich Spirotrichea (Ciliophora).

Authors:  Wilhelm Foissner; Helga Müller; Sabine Agatha
Journal:  Eur J Protistol       Date:  2007-09-04       Impact factor: 3.020

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