Literature DB >> 22427450

Description of Cobetia amphilecti sp. nov., Cobetia litoralis sp. nov. and Cobetia pacifica sp. nov., classification of Halomonas halodurans as a later heterotypic synonym of Cobetia marina and emended descriptions of the genus Cobetia and Cobetia marina.

Lyudmila A Romanenko1, Naoto Tanaka2, Vassilii I Svetashev3, Enevold Falsen4.   

Abstract

A group of five Gram-negative, aerobic, halotolerant, non-pigmented bacteria isolated from shallow sediment samples and invertebrate specimens collected from the Gulf of Alaska and the Sea of Japan was subjected to taxonomic study. On the basis of 16S rRNA gene sequence analysis, the novel isolates were affiliated to the genus Cobetia, sharing the highest sequence similarity of 99.3-99.9 % with Cobetia marina DSM 4741(T). DNA-DNA hybridization experiments between and among the novel strains and C. marina DSM 4741(T) and Cobetia crustatorum JCM 15644(T) revealed that the five strains represent three separate genospecies, which could be differentiated in their morphological, physiological and biochemical characteristics. Halomonas halodurans NBRC 15607(T) was included in this study as it has recently been reported to exhibit high 16S rRNA gene sequence similarity to C. marina DSM 4741(T), and it showed a high DNA relatedness value of 96 % with C. marina DSM 4741(T), indicating that they belong to the same species. On the basis of phylogenetic analysis, DNA-DNA hybridization and phenotypic characterization, three novel species are proposed, named Cobetia amphilecti sp. nov. (type strain KMM 1561(T) = NRIC 0815(T) = CCUG 49560(T)), Cobetia litoralis sp. nov. (type strain KMM 3880(T) =NRIC 0814(T) =CCUG 49563(T)) and Cobetia pacifica sp. nov. (type strain KMM 3879(T) = NRIC 0813(T) = CCUG 49562(T)). It is also proposed that Halomonas halodurans is a later heterotypic synonym of Cobetia marina, and emended descriptions of the genus Cobetia and the species Cobetia marina are provided.

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Year:  2012        PMID: 22427450     DOI: 10.1099/ijs.0.036863-0

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  11 in total

1.  Complete genome sequence of the halophilic PHA-producing bacterium Halomonas sp. SF2003: insights into its biotechnological potential.

Authors:  Tatiana Thomas; Anne Elain; Alexis Bazire; Stéphane Bruzaud
Journal:  World J Microbiol Biotechnol       Date:  2019-03-09       Impact factor: 3.312

2.  Microbulbifer okhotskensis sp. nov., isolated from a deep bottom sediment of the Okhotsk Sea.

Authors:  Lyudmila Romanenko; Valeriya Kurilenko; Nadezhda Otstavnykh; Peter Velansky; Marina Isaeva; Valery Mikhailov
Journal:  Arch Microbiol       Date:  2022-08-10       Impact factor: 2.667

3.  Natural products and morphogenic activity of γ-Proteobacteria associated with the marine hydroid polyp Hydractinia echinata.

Authors:  Huijuan Guo; Maja Rischer; Martin Sperfeld; Christiane Weigel; Klaus Dieter Menzel; Jon Clardy; Christine Beemelmanns
Journal:  Bioorg Med Chem       Date:  2017-07-01       Impact factor: 3.641

4.  Everything Is Everywhere: Physiological Responses of the Mediterranean Sea and Eastern Pacific Ocean Epiphyte Cobetia Sp. to Varying Nutrient Concentration.

Authors:  Víctor Fernández-Juárez; Daniel Jaén-Luchoro; Jocelyn Brito-Echeverría; Nona S R Agawin; Antoni Bennasar-Figueras; Pedro Echeveste
Journal:  Microb Ecol       Date:  2021-05-05       Impact factor: 4.552

5.  The hydrocarbon-degrading marine bacterium Cobetia sp. strain MM1IDA2H-1 produces a biosurfactant that interferes with quorum sensing of fish pathogens by signal hijacking.

Authors:  C Ibacache-Quiroga; J Ojeda; G Espinoza-Vergara; P Olivero; M Cuellar; M A Dinamarca
Journal:  Microb Biotechnol       Date:  2013-01-02       Impact factor: 5.813

6.  Genome Sequence of Cobetia sp. Strain MM1IDA2H-1, a Hydrocarbon-Degrading and Biosurfactant-Producing Marine Bacterium.

Authors:  Claudia Ibacache-Quiroga; Christian Canales; Mariam Charifeh; M Alejandro Dinamarca
Journal:  Genome Announc       Date:  2017-04-13

7.  Are the Closely Related Cobetia Strains of Different Species?

Authors:  Yulia Noskova; Aleksandra Seitkalieva; Olga Nedashkovskaya; Liudmila Shevchenko; Liudmila Tekutyeva; Oksana Son; Larissa Balabanova
Journal:  Molecules       Date:  2021-01-28       Impact factor: 4.411

8.  Global distribution patterns of marine nitrogen-fixers by imaging and molecular methods.

Authors:  Juan José Pierella Karlusich; Eric Pelletier; Fabien Lombard; Madeline Carsique; Etienne Dvorak; Sébastien Colin; Marc Picheral; Francisco M Cornejo-Castillo; Silvia G Acinas; Rainer Pepperkok; Eric Karsenti; Colomban de Vargas; Patrick Wincker; Chris Bowler; Rachel A Foster
Journal:  Nat Commun       Date:  2021-07-06       Impact factor: 14.919

9.  Data supporting functional diversity of the marine bacterium Cobetia amphilecti KMM 296.

Authors:  Larissa Balabanova; Olga Nedashkovskaya; Anna Podvolotskaya; Lubov Slepchenko; Vasily Golotin; Alexey Belik; Ludmila Shevchenko; Oksana Son; Valery Rasskazov
Journal:  Data Brief       Date:  2016-06-28

10.  Screening of polyhydroxyalkanoate-producing bacteria and PhaC-encoding genes in two hypersaline microbial mats from Guerrero Negro, Baja California Sur, Mexico.

Authors:  Carolina A Martínez-Gutiérrez; Hever Latisnere-Barragán; José Q García-Maldonado; Alejandro López-Cortés
Journal:  PeerJ       Date:  2018-05-07       Impact factor: 2.984

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