Literature DB >> 22425669

Very large fMRI study using the IMAGEN database: sensitivity-specificity and population effect modeling in relation to the underlying anatomy.

Benjamin Thyreau1, Yannick Schwartz, Bertrand Thirion, Vincent Frouin, Eva Loth, Sabine Vollstädt-Klein, Tomas Paus, Eric Artiges, Patricia J Conrod, Gunter Schumann, Robert Whelan, Jean-Baptiste Poline.   

Abstract

In this paper we investigate the use of classical fMRI Random Effect (RFX) group statistics when analyzing a very large cohort and the possible improvement brought from anatomical information. Using 1326 subjects from the IMAGEN study, we first give a global picture of the evolution of the group effect t-value from a simple face-watching contrast with increasing cohort size. We obtain a wide activated pattern, far from being limited to the reasonably expected brain areas, illustrating the difference between statistical significance and practical significance. This motivates us to inject tissue-probability information into the group estimation, we model the BOLD contrast using a matter-weighted mixture of Gaussians and compare it to the common, single-Gaussian model. In both cases, the model parameters are estimated per-voxel for one subgroup, and the likelihood of both models is computed on a second, separate subgroup to reflect model generalization capacity. Various group sizes are tested, and significance is asserted using a 10-fold cross-validation scheme. We conclude that adding matter information consistently improves the quantitative analysis of BOLD responses in some areas of the brain, particularly those where accurate inter-subject registration remains challenging.
Copyright © 2012 Elsevier Inc. All rights reserved.

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Year:  2012        PMID: 22425669     DOI: 10.1016/j.neuroimage.2012.02.083

Source DB:  PubMed          Journal:  Neuroimage        ISSN: 1053-8119            Impact factor:   6.556


  16 in total

1.  Reappraisal of the anatomical landmarks of motor and premotor cortical regions for image-guided brain navigation in TMS practice.

Authors:  Rechdi Ahdab; Samar S Ayache; Wassim H Farhat; Veit Mylius; Sein Schmidt; Pierre Brugières; Jean-Pascal Lefaucheur
Journal:  Hum Brain Mapp       Date:  2013-09-03       Impact factor: 5.038

Review 2.  What is a representative brain? Neuroscience meets population science.

Authors:  Emily B Falk; Luke W Hyde; Colter Mitchell; Jessica Faul; Richard Gonzalez; Mary M Heitzeg; Daniel P Keating; Kenneth M Langa; Meghan E Martz; Julie Maslowsky; Frederick J Morrison; Douglas C Noll; Megan E Patrick; Fabian T Pfeffer; Patricia A Reuter-Lorenz; Moriah E Thomason; Pamela Davis-Kean; Christopher S Monk; John Schulenberg
Journal:  Proc Natl Acad Sci U S A       Date:  2013-10-22       Impact factor: 11.205

3.  Task Dependence, Tissue Specificity, and Spatial Distribution of Widespread Activations in Large Single-Subject Functional MRI Datasets at 7T.

Authors:  Javier Gonzalez-Castillo; Colin W Hoy; Daniel A Handwerker; Vinai Roopchansingh; Souheil J Inati; Ziad S Saad; Robert W Cox; Peter A Bandettini
Journal:  Cereb Cortex       Date:  2014-07-01       Impact factor: 5.357

4.  Bootstrapping fMRI Data: Dealing with Misspecification.

Authors:  Sanne P Roels; Beatrijs Moerkerke; Tom Loeys
Journal:  Neuroinformatics       Date:  2015-07

Review 5.  Biomarkers, designs, and interpretations of resting-state fMRI in translational pharmacological research: A review of state-of-the-Art, challenges, and opportunities for studying brain chemistry.

Authors:  Najmeh Khalili-Mahani; Serge A R B Rombouts; Matthias J P van Osch; Eugene P Duff; Felix Carbonell; Lisa D Nickerson; Lino Becerra; Albert Dahan; Alan C Evans; Jean-Paul Soucy; Richard Wise; Alex P Zijdenbos; Joop M van Gerven
Journal:  Hum Brain Mapp       Date:  2017-02-01       Impact factor: 5.038

6.  Reliability of the depth-dependent high-resolution BOLD hemodynamic response in human visual cortex and vicinity.

Authors:  Jung Hwan Kim; David Ress
Journal:  Magn Reson Imaging       Date:  2017-01-28       Impact factor: 2.546

7.  Inter-subject Registration of Functional Images: Do We Need Anatomical Images?

Authors:  Elvis Dohmatob; Gael Varoquaux; Bertrand Thirion
Journal:  Front Neurosci       Date:  2018-02-14       Impact factor: 4.677

8.  Neural correlates of three types of negative life events during angry face processing in adolescents.

Authors:  Fanny Gollier-Briant; Marie-Laure Paillère-Martinot; Hervé Lemaitre; Ruben Miranda; Hélène Vulser; Robert Goodman; Jani Penttilä; Maren Struve; Tahmine Fadai; Viola Kappel; Luise Poustka; Yvonne Grimmer; Uli Bromberg; Patricia Conrod; Tobias Banaschewski; Gareth J Barker; Arun L W Bokde; Christian Büchel; Herta Flor; Juergen Gallinat; Hugh Garavan; Andreas Heinz; Claire Lawrence; Karl Mann; Frauke Nees; Tomas Paus; Zdenka Pausova; Vincent Frouin; Marcella Rietschel; Trevor W Robbins; Michael N Smolka; Gunter Schumann; Jean-Luc Martinot; Eric Artiges
Journal:  Soc Cogn Affect Neurosci       Date:  2016-10-03       Impact factor: 3.436

Review 9.  Addictions Neuroclinical Assessment: A Neuroscience-Based Framework for Addictive Disorders.

Authors:  Laura E Kwako; Reza Momenan; Raye Z Litten; George F Koob; David Goldman
Journal:  Biol Psychiatry       Date:  2015-11-17       Impact factor: 13.382

10.  The Power of Theory, Research Design, and Transdisciplinary Integration in Moving Psychopathology Forward.

Authors:  Uma Vaidyanathan; Scott I Vrieze; William G Iacono
Journal:  Psychol Inq       Date:  2015-08-28
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