Literature DB >> 22422856

Standardized one-step real-time reverse transcription-PCR assay for universal detection and quantification of hepatitis delta virus from clinical samples in the presence of a heterologous internal-control RNA.

Caroline Scholtes1, Vinca Icard, Majid Amiri, Philippe Chevallier-Queyron, Mary-Anne Trabaud, Christophe Ramière, Fabien Zoulim, Patrice André, Paul Dény.   

Abstract

As for other chronic viral diseases, quantification of hepatitis delta virus (HDV) loads may be useful for patient management. We describe a one-step quantitative reverse transcription-PCR assay that is reliable and automatable and meets the regulatory authorities' standards for accurate quantification of the major HDV genotypes. It includes an internal control and uses in vitro-transcribed RNAs as standards. Its linearity range is 500 to 1.7 × 10(11) copies/ml, its sensitivity is around 150 copies/ml, its repeatability is around 15%, and its reproducibility is below 0.25 log(10) copies/ml.

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Year:  2012        PMID: 22422856      PMCID: PMC3372137          DOI: 10.1128/JCM.06829-11

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN: 0095-1137            Impact factor:   5.948


  18 in total

Review 1.  Hepatitis delta virus.

Authors:  Sarah A Hughes; Heiner Wedemeyer; Phillip M Harrison
Journal:  Lancet       Date:  2011-04-20       Impact factor: 79.321

2.  Improvement of HRV quantification using cRNA-based standards for real time RT-PCR.

Authors:  Maria Elena Terlizzi; Massimiliano Bergallo; Sara Astegiano; Francesca Sidoti; Stefano Gambarino; Paolo Solidoro; Cristina Costa; Rossana Cavallo
Journal:  Mol Biotechnol       Date:  2011-05       Impact factor: 2.695

3.  Establishment of a novel quantitative hepatitis D virus (HDV) RNA assay using the Cobas TaqMan platform to study HDV RNA kinetics.

Authors:  Ingmar Mederacke; Birgit Bremer; Benjamin Heidrich; Janina Kirschner; Katja Deterding; Thomas Bock; Karsten Wursthorn; Michael P Manns; Heiner Wedemeyer
Journal:  J Clin Microbiol       Date:  2010-03-29       Impact factor: 5.948

4.  Quantitative longitudinal evaluations of hepatitis delta virus RNA and hepatitis B virus DNA shows a dynamic, complex replicative profile in chronic hepatitis B and D.

Authors:  Melanie Schaper; Francisco Rodriguez-Frias; Rosendo Jardi; David Tabernero; Maria Homs; Gerardo Ruiz; Josep Quer; Rafael Esteban; Maria Buti
Journal:  J Hepatol       Date:  2010-03-05       Impact factor: 25.083

5.  Quantitation of hepatitis delta virus using a single-step internally controlled real-time RT-qPCR and a full-length genomic RNA calibration standard.

Authors:  R B Ferns; E Nastouli; J A Garson
Journal:  J Virol Methods       Date:  2011-11-15       Impact factor: 2.014

6.  Clinical outcome of acute and chronic hepatitis delta over time: a long-term follow-up study.

Authors:  M Buti; M Homs; F Rodriguez-Frias; G Funalleras; R Jardí; S Sauleda; D Tabernero; M Schaper; R Esteban
Journal:  J Viral Hepat       Date:  2011-06       Impact factor: 3.728

7.  Quantitative detection and typing of hepatitis D virus in human serum by real-time polymerase chain reaction and melting curve analysis.

Authors:  Joerg Hofmann; Katrin Frenzel; Bui Q Minh; Arndt von Haeseler; Anke Edelmann; Stefan R Ross; Thomas Berg; Detlev H Krüger; Helga Meisel
Journal:  Diagn Microbiol Infect Dis       Date:  2010-06       Impact factor: 2.803

8.  Replicative and transcriptional activities of hepatitis B virus in patients coinfected with hepatitis B and hepatitis delta viruses.

Authors:  Teresa Pollicino; Giuseppina Raffa; Teresa Santantonio; Giovanni Battista Gaeta; Giuliano Iannello; Angela Alibrandi; Giovanni Squadrito; Irene Cacciola; Chiara Calvi; Giuseppe Colucci; Massimo Levrero; Giovanni Raimondo
Journal:  J Virol       Date:  2010-10-20       Impact factor: 5.103

Review 9.  Hepatitis delta virus genetic variability: from genotypes I, II, III to eight major clades?

Authors:  P Dény
Journal:  Curr Top Microbiol Immunol       Date:  2006       Impact factor: 4.291

Review 10.  Practical experience of high throughput real time PCR in the routine diagnostic virology setting.

Authors:  R N Gunson; T C Collins; W F Carman
Journal:  J Clin Virol       Date:  2006-02-07       Impact factor: 3.168

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  5 in total

1.  Serological and molecular diagnosis of hepatitis delta virus infection: results of a French national quality control study.

Authors:  Ségolène Brichler; Frédéric Le Gal; Fernando Neri-Pinto; Wael Mansour; Dominique Roulot; Syria Laperche; Emmanuel Gordien
Journal:  J Clin Microbiol       Date:  2014-02-12       Impact factor: 5.948

2.  Hepatitis D Virus: A Call to Screening.

Authors:  Joseph Ahn; Robert G Gish
Journal:  Gastroenterol Hepatol (N Y)       Date:  2014-10

3.  Relevance of a full-length genomic RNA standard and a thermal-shock step for optimal hepatitis delta virus quantification.

Authors:  Maria Homs; Katja Giersch; Maria Blasi; Marc Lütgehetmann; Maria Buti; Rafael Esteban; Maura Dandri; Francisco Rodriguez-Frias
Journal:  J Clin Microbiol       Date:  2014-07-02       Impact factor: 5.948

4.  Effect of tenofovir with and without interferon on hepatitis D virus replication in HIV-hepatitis B virus-hepatitis D virus-infected patients.

Authors:  Anders Boyd; Patrick Miailhes; Ségolène Brichler; Caroline Scholtès; Sarah Maylin; Constance Delaugerre; Phillipe Chevallier-Queyron; Emmanuel Gordien; Pierre-Marie Girard; Karine Lacombe
Journal:  AIDS Res Hum Retroviruses       Date:  2013-09-24       Impact factor: 2.205

Review 5.  Hepatitis delta virus: a peculiar virus.

Authors:  Carolina Alves; Cristina Branco; Celso Cunha
Journal:  Adv Virol       Date:  2013-10-02
  5 in total

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