Literature DB >> 22419613

The extension peptide of plant ferritin from sea lettuce contributes to shell stability and surface hydrophobicity.

Taro Masuda1, Shin-Ichiro Morimoto, Bunzo Mikami, Haruhiko Toyohara.   

Abstract

Plant ferritins have some unique structural and functional features. Most of these features can be related to the plant-specific "extension peptide" (EP), which exists in the N-terminus of the mature region of a plant ferritin. Recent crystallographic analysis of a plant ferritin revealed the structure of the EP, however, two points remain unclear: (i) whether the structures of well-conserved EP of plant ferritins are common in all plants, and (ii) whether the EP truly contributes to the shell stability of the plant ferritin oligomer. To clarify these matters, we have cloned a green-plant-type ferritin cDNA from a green alga, Ulva pertusa, and investigated its crystal structure. Ulva pertusa ferritin (UpFER) has a plant-ferritin-specific extension peptide composed of 28 amino acid residues. In the crystal structure of UpFER, the EP lay on and interacted with the neighboring threefold symmetry-related subunit. The amino acid residues involved in the interaction were very highly conserved among plant ferritins. The EPs masked the hydrophobic pockets on the ferritin shell surface by lying on them, and this made the ferritin oligomer more hydrophilic. Furthermore, differential scanning calorimetric analysis of the native and its EP-deletion mutant suggested that the EP contributed to the thermal stability of the plant ferritin shell. Thus, the shell stability and surface hydrophobicity of plant ferritin were controlled by the presence or absence of the plant-ferritin-specific EP. This regulation can account for those processes such as shell stability, degradation, and association of plant ferritin, which are significantly related to iron utilization in plants.
Copyright © 2012 The Protein Society.

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Year:  2012        PMID: 22419613      PMCID: PMC3403414          DOI: 10.1002/pro.2061

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  40 in total

1.  A novel plant ferritin subunit from soybean that is related to a mechanism in iron release.

Authors:  T Masuda; F Goto; T Yoshihara
Journal:  J Biol Chem       Date:  2001-03-14       Impact factor: 5.157

2.  PHENIX: building new software for automated crystallographic structure determination.

Authors:  Paul D Adams; Ralf W Grosse-Kunstleve; Li Wei Hung; Thomas R Ioerger; Airlie J McCoy; Nigel W Moriarty; Randy J Read; James C Sacchettini; Nicholas K Sauter; Thomas C Terwilliger
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2002-10-21

3.  Critical roles of bacterioferritins in iron storage and proliferation of cyanobacteria.

Authors:  Nir Keren; Rajeev Aurora; Himadri B Pakrasi
Journal:  Plant Physiol       Date:  2004-07-09       Impact factor: 8.340

4.  Refinement of macromolecular structures by the maximum-likelihood method.

Authors:  G N Murshudov; A A Vagin; E J Dodson
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1997-05-01

5.  Purification, characterization and function of bacterioferritin from the cyanobacterium Synechocystis P.C.C. 6803.

Authors:  J P Laulhère; A M Labouré; O Van Wuytswinkel; J Gagnon; J F Briat
Journal:  Biochem J       Date:  1992-02-01       Impact factor: 3.857

6.  Coot: model-building tools for molecular graphics.

Authors:  Paul Emsley; Kevin Cowtan
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2004-11-26

Review 7.  Ferritins: iron/oxygen biominerals in protein nanocages.

Authors:  Elizabeth C Theil; Manolis Matzapetakis; Xiaofeng Liu
Journal:  J Biol Inorg Chem       Date:  2006-07-26       Impact factor: 3.358

8.  The dodecameric ferritin from Listeria innocua contains a novel intersubunit iron-binding site.

Authors:  A Ilari; S Stefanini; E Chiancone; D Tsernoglou
Journal:  Nat Struct Biol       Date:  2000-01

9.  FER1 and FER2 encoding two ferritin complexes in Chlamydomonas reinhardtii chloroplasts are regulated by iron.

Authors:  Joanne C Long; Frederik Sommer; Michael D Allen; Shu-Fen Lu; Sabeeha S Merchant
Journal:  Genetics       Date:  2008-05       Impact factor: 4.562

10.  A graphical user interface to the CCP4 program suite.

Authors:  Elizabeth Potterton; Peter Briggs; Maria Turkenburg; Eleanor Dodson
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2003-06-27
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  3 in total

1.  The first crystal structure of crustacean ferritin that is a hybrid type of H and L ferritin.

Authors:  Taro Masuda; Jiachen Zang; Guanghua Zhao; Bunzo Mikami
Journal:  Protein Sci       Date:  2018-11       Impact factor: 6.725

2.  Overexpression of wheat ferritin gene TaFER-5B enhances tolerance to heat stress and other abiotic stresses associated with the ROS scavenging.

Authors:  Xinshan Zang; Xiaoli Geng; Fei Wang; Zhenshan Liu; Liyuan Zhang; Yue Zhao; Xuejun Tian; Zhongfu Ni; Yingyin Yao; Mingming Xin; Zhaorong Hu; Qixin Sun; Huiru Peng
Journal:  BMC Plant Biol       Date:  2017-01-14       Impact factor: 4.215

3.  Crystallographic characterization of a marine invertebrate ferritin from the sea cucumber Apostichopus japonicus.

Authors:  Yan Wu; Tinghong Ming; Chunheng Huo; Xiaoting Qiu; Chang Su; Chenyang Lu; Jun Zhou; Ye Li; Xiurong Su
Journal:  FEBS Open Bio       Date:  2022-02-07       Impact factor: 2.693

  3 in total

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