Literature DB >> 22414119

On the deactivation mechanisms of adenine-thymine base pair.

João Paulo Gobbo1, Vicenta Saurí, Daniel Roca-Sanjuán, Luis Serrano-Andrés, Manuela Merchán, Antonio Carlos Borin.   

Abstract

In this contribution, the multiconfigurational second-order perturbation theory method based on a complete active space reference wave function (CASSCF/CASPT2) is applied to study all possible single and double proton/hydrogen transfers between the nucleobases in the adenine-thymine (AT) base pair, analyzing the role of excited states with different nature [localized (LE) and charge transfer (CT)], and considering concerted as well as step-wise mechanisms. According to the findings, once the lowest excited states, localized in adenine, are populated during UV irradiation of the Watson-Crick base pair, the proton transfer in the N-O bridge does not require high energy in order to populate a CT state. The latter state will immediately relax toward a crossing with the ground state, which will funnel the system to either the canonical structure or the imino-enol tautomer. The base pair is also capable of repairing itself easily since the imino-enol species is unstable to thermal conversion.

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Year:  2012        PMID: 22414119     DOI: 10.1021/jp300583h

Source DB:  PubMed          Journal:  J Phys Chem B        ISSN: 1520-5207            Impact factor:   2.991


  6 in total

1.  The IPEA dilemma in CASPT2.

Authors:  J Patrick Zobel; Juan J Nogueira; Leticia González
Journal:  Chem Sci       Date:  2016-09-26       Impact factor: 9.825

2.  Role of Electron-Driven Proton-Transfer Processes in the Ultrafast Deactivation of Photoexcited Anionic 8-oxoGuanine-Adenine and 8-oxoGuanine-Cytosine Base Pairs.

Authors:  Xiuxiu Wu; Tolga N V Karsili; Wolfgang Domcke
Journal:  Molecules       Date:  2017-01-14       Impact factor: 4.411

3.  UVC photon-induced denaturing of DNA: A possible dissipative route to Archean enzyme-less replication.

Authors:  Karo Michaelian; Norberto Santillán Padilla
Journal:  Heliyon       Date:  2019-06-18

4.  The Ultrafast Quantum Dynamics of Photoexcited Adenine-Thymine Basepair Investigated with a Fragment-based Diabatization and a Linear Vibronic Coupling Model.

Authors:  Martha Yaghoubi Jouybari; James A Green; Roberto Improta; Fabrizio Santoro
Journal:  J Phys Chem A       Date:  2021-10-05       Impact factor: 2.944

5.  Electron-driven proton transfer relieves excited-state antiaromaticity in photoexcited DNA base pairs.

Authors:  Lucas J Karas; Chia-Hua Wu; Henrik Ottosson; Judy I Wu
Journal:  Chem Sci       Date:  2020-08-12       Impact factor: 9.825

6.  Multiple Decay Mechanisms and 2D-UV Spectroscopic Fingerprints of Singlet Excited Solvated Adenine-Uracil Monophosphate.

Authors:  Quansong Li; Angelo Giussani; Javier Segarra-Martí; Artur Nenov; Ivan Rivalta; Alexander A Voityuk; Shaul Mukamel; Daniel Roca-Sanjuán; Marco Garavelli; Lluís Blancafort
Journal:  Chemistry       Date:  2016-04-26       Impact factor: 5.236

  6 in total

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